Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00805 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAAATTTGGATCTGTTTCTCTGGATTCTCATGATGAGACACTAAGTAATAAAGGATCCCCTCGACATTTTGTCAAAGATGTTTTGTCTTCTCAAAATCCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAGCCCATACCAAATGGTTTTTACTCAGTCCTTCCGGAAACAAGACTCAAGGAACTTTTTGATAACATTCCTACCTTGGACGAGCTTCATGCTTTGGGTGGAGAGGGTTTTAAGGCTGACATCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTGATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCAGCTGCCATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGTCCCAATGTGGAAAGTCCAGCAAAAGCTGCGGTAGATGAAACCTCTCACATGTTTGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAACATGGTTCTTGCCGTCCTCGAGCTATTTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCGTGGTGGGCTTGCCAAATGATGGAGCTACTGAATGTCAAGATTCGTACAAGCATATGTCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCAGGCCAATTGTTACCACAATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGCGCAGGAGAGAGTGATTCAGCAGAAAATGATTCGTGTGATTCACCATTAGAACCAAACAGCCCTTTATTTGGGGTTTCGGAGAGTGTTGAGAAGGATGAAAGCCTCCAATTCCATAGAAGATTTGAGCCAACTTCAAATGCATCTGGCCTTTCCTTGAGAAATGTGATGTTACGAACAAATAGCAGTTTGAGCCTGTCTCATAGTGAACCCAACATTGGCACTACATTAGGTCGGCGTAGTCGGAAAAAGATCATTGCTGACCAGAGGACGGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGAAGGTCCATGCTTAGTGGTGATAGGGCAGCATTTAGGGATTTTACTGATGATCAGGCTACATCAAGATCTAGCTATAGATCAGATGGTGCATCCTCGTCAGAAACCCGGAGGATAAGAAGAAGAAGCATCAGTATTACACCAGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCTATGAATGAAACTTTGAAGCAAAATCGTCTCTTGAGAGAACGAGGGGATGATAACTCGATCCCCCATTCTCCAAACAATATTAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTCCATCGTGATGGTCATGATGCTCTATATTCTCGTCAGCATGACCAAGGAAATTCACAAAAGGCAATGTCATTACCATCTTCACCACATGATTATAGAGGTCAGGCTTCGGAGAGAAGTGGACCGTCGAGGTATGGAGTGAATGATGAAATGGAGTCGACTTGGAATAAAGTACTGGAATCTCCGATGTTCAATAATAAACCTCTGTTACCTTATGAAAAATGGAATATTGATTTCTCTGAATTGACTGTTGGAACCCGTGTAGGTATTGGTTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATTTCTATTCTGAGCCGACTCCGACATCCTAATGTTATCTTGTTTCTCGGTGCTTGCACAAAGCCTCCACGCTTGTCAATGGTTACAGAATATATGGAATTGGGATCATTGTACTACTTGATACATTTGAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAATTTTAAGTTCATTTCGGGTTTGATGTGCATACATCGAATGAAGGTTGTTCACCGTGATCTGAAAAGCGCAAACTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGAATAACAACAGACTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGCAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAGTACCACCTGAGAGGGTGGTTTATTCCGTTGCAAATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTGATTTCAGACTGTTGGGCAGAATCTCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGGTTGGTGGACATCGAGTACTCCTTGTGCTGA 2442 0.423 MEETREDAGPTEQGPSNVSWWPSDFVEKFGSVSLDSHDETLSNKGSPRHFVKDVLSSQNPSQTLWRTGMLSEPIPNGFYSVLPETRLKELFDNIPTLDELHALGGEGFKADIILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAAVDETSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGATECQDSYKHMSLIVVLNSVEMLVDLMRFPGQLLPQSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKDESLQFHRRFEPTSNASGLSLRNVMLRTNSSLSLSHSEPNIGTTLGRRSRKKIIADQRTASSSPEHPSFRARGRSMLSGDRAAFRDFTDDQATSRSSYRSDGASSSETRRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSIPHSPNNISSDANLQKNVSNFHRDGHDALYSRQHDQGNSQKAMSLPSSPHDYRGQASERSGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICNFKFISGLMCIHRMKVVHRDLKSANCLVNKHWTVKICDFGLSRITTDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYSVANEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00805 813 MobiDBLite consensus disorder prediction 1 20 - -
Lapu5g00805 813 MobiDBLite consensus disorder prediction 270 284 - -
Lapu5g00805 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
Lapu5g00805 813 MobiDBLite consensus disorder prediction 481 518 - -
Lapu5g00805 813 ProSitePatterns Protein kinases ATP-binding region signature. 558 579 IPR017441 GO:0005524
Lapu5g00805 813 MobiDBLite consensus disorder prediction 270 292 - -
Lapu5g00805 813 SMART serkin_6 552 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00805 813 Gene3D Phosphorylase Kinase; domain 1 545 630 - -
Lapu5g00805 813 Gene3D Transferase(Phosphotransferase) domain 1 631 811 - -
Lapu5g00805 813 MobiDBLite consensus disorder prediction 332 411 - -
Lapu5g00805 813 MobiDBLite consensus disorder prediction 388 403 - -
Lapu5g00805 813 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Lapu5g00805 813 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 329 805 - -
Lapu5g00805 813 ProSiteProfiles Protein kinase domain profile. 552 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00805 813 Pfam Protein tyrosine and serine/threonine kinase 553 805 IPR001245 GO:0004672|GO:0006468
Lapu5g00805 813 MobiDBLite consensus disorder prediction 482 504 - -
Lapu5g00805 813 SUPERFAMILY Protein kinase-like (PK-like) 526 805 IPR011009 -
Lapu5g00805 813 CDD STKc_MAP3K-like 558 805 - -
Lapu5g00805 813 FunFam Serine/threonine-protein kinase isoform 1 542 630 - -
Lapu5g00805 813 MobiDBLite consensus disorder prediction 440 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00805 Lapu-Chr5 8224162 8250484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00805 1 813 MAP Kinase Kinase Kinase AT3G58640 70.581 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lapu5g00805 PK_Tyr_Ser-Thr 5e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00805 - - gmx:100803469 1474.14