Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00800 ATGGCTTCCTCCAAGGATCGCGACAACTTCGTCTACATCGCCAAGCTTGCCGAACAGGCCGAGCGATACGAAGAGATGGTGGATTCGATGAAGAAGGTTGCGAATCTAGACGTTGAACTGACTGTGGAGGAGCGTAATTTGCTTTCTGTTGGATACAAGAATGTGATTGGTGCTCGGAGGGCGTCATGGAGGATTTTGTCTTCCATAGAGCAGAAGGAAGAGACAAAAGGGAATGAATTGAATGCGAAGCGGATTAAGGAGTATAGGCAGAAGGTTGAATTGGAGCTTTCGAACATCTGTAATGATGTTATGAGAGTGATTGATGAACATCTTATTCCTTCGGCTGCAGCTGGTGAATCCACTGTGTTTTACTATAAGATGAAAGGAGATTACTATCGTTATCTTGCTGAATTTAAGACCGGCAATGAGAAGAAGGAAGCTGCTGACCAGTCTATGAAAGCATATGAGACGTCTTCTGTTGTATTGGGGAAAAGTGTGTACTCCTCTGATTTGAACAAGTCTGCTACCACTGCAGCCGAGTCTGATTTACCACCCACACACCCCATCCGATTGGGTCTAGCTTTAAATTTCTCAGTCTTCTATTATGAGATCTTGAATTCCCCAGAAAGAGCTTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCTGAGCTGGACACCTTGAACGAGGAGTCATACAAAGATAGCACCTTAATCATGCAACTTCTCAGAGACAATCTAACTTTGTGGACTTCTGACATCCCAGAAGATGGAGGTAATTATTACTAG 792 0.4356 MASSKDRDNFVYIAKLAEQAERYEEMVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAADQSMKAYETSSVVLGKSVYSSDLNKSATTAAESDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGNYY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00800 263 SMART 1433_4 7 261 IPR023410 -
Lapu5g00800 263 PRINTS 14-3-3 protein zeta signature 225 254 IPR000308 -
Lapu5g00800 263 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lapu5g00800 263 PRINTS 14-3-3 protein zeta signature 198 224 IPR000308 -
Lapu5g00800 263 Coils Coil 13 33 - -
Lapu5g00800 263 Coils Coil 212 232 - -
Lapu5g00800 263 PIRSF 14-3-3 1 171 IPR000308 -
Lapu5g00800 263 PIRSF 14-3-3 164 262 IPR000308 -
Lapu5g00800 263 FunFam 14-3-3 protein epsilon 2 262 - -
Lapu5g00800 263 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lapu5g00800 263 ProSitePatterns 14-3-3 proteins signature 2. 234 253 IPR023409 -
Lapu5g00800 263 Gene3D - 1 261 IPR036815 -
Lapu5g00800 263 Pfam 14-3-3 protein 14 252 IPR023410 -
Lapu5g00800 263 SUPERFAMILY 14-3-3 protein 6 254 IPR036815 -
Lapu5g00800 263 PANTHER 14-3-3 PROTEIN 7 255 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00800 Lapu-Chr5 8093791 8097870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00800 1 261 14-3-3 family AT2G42590 78.544 1.81e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00800 K06630 - gmx:100801348 455.292