Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00783 ATGGCGCAATTACCTCCAAAGATCCCAAACGTGTCACCAAGTTGGCCAGACTTCTCTTCTCAACACCAGAAGATGCCATTGCCACCTCTTGACAACGGCACCACCACCAACAACACAGGCCATTATCATCATCACCATCAAAATCAAAACCCTTCTTGGGTGGACGAGTTCCTAGACTTCTCCTCCTCCCGACGCGGCGCTCACAGGCGGTCGGTGAGCGATTCCATCACCTACTTGGACGCACCAACGAGGTGTGGTGGGAACGACAACAATAACAATAATAATAGCAATGAGAATGAGTTTGACAAGTTTGATGATGAGCAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCATGCCACCACCAATTACCTTATCCTCTTCTAACCCTTCAAGCCCTTCCGATCAGAACTTCTTCCATGATGAGAAAGAGAGCAGCCAGAAGAAGATGAAGCTGGAGAAGGAGGAAGAGGAGCACCACCACCACCAATTGAAAAATGAAGCAGATGAGGTTGAAAGCCAATGCATACAGGAAATTATGCATCCTCCAAATGACACAAATACTTCTTCTTCCAATGAGAGAATTACTGACCCCAAGAGAGTTAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGAAGTGCAACTTCATTACAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTCAATGTCGACAACAGTGCTCTTAAGCAAAGAATCGCTGCCCTTGCACAAGACAAGATCTTTAAAGATGCTCATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATCACCAACAGAGCCTCAAGAAGATGGAAAATGCTGCAGGGTCACCACCATTACCATTACCATCTCCATCACCAAATCCTATATGTGACCTGCAAACAGAAAAGGAAGTACAACTTCTCAACGTTTGA 1017 0.4562 MAQLPPKIPNVSPSWPDFSSQHQKMPLPPLDNGTTTNNTGHYHHHHQNQNPSWVDEFLDFSSSRRGAHRRSVSDSITYLDAPTRCGGNDNNNNNNSNENEFDKFDDEQFMSMFTDEVVLSGVPMPPPITLSSSNPSSPSDQNFFHDEKESSQKKMKLEKEEEEHHHHQLKNEADEVESQCIQEIMHPPNDTNTSSSNERITDPKRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSLKKMENAAGSPPLPLPSPSPNPICDLQTEKEVQLLNV* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00783 338 MobiDBLite consensus disorder prediction 123 172 - -
Lapu5g00783 338 Coils Coil 152 179 - -
Lapu5g00783 338 Coils Coil 283 303 - -
Lapu5g00783 338 SUPERFAMILY Leucine zipper domain 204 258 IPR046347 GO:0003700|GO:0006355
Lapu5g00783 338 PANTHER BASIC LEUCINE ZIPPER 34 1 312 - -
Lapu5g00783 338 MobiDBLite consensus disorder prediction 82 101 - -
Lapu5g00783 338 Gene3D - 203 275 - -
Lapu5g00783 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 254 IPR004827 GO:0003700|GO:0006355
Lapu5g00783 338 MobiDBLite consensus disorder prediction 301 325 - -
Lapu5g00783 338 MobiDBLite consensus disorder prediction 142 172 - -
Lapu5g00783 338 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Lapu5g00783 338 MobiDBLite consensus disorder prediction 13 50 - -
Lapu5g00783 338 CDD bZIP_plant_RF2 205 255 IPR044759 GO:0003700|GO:0006355
Lapu5g00783 338 Pfam Basic region leucine zipper 201 249 IPR004827 GO:0003700|GO:0006355
Lapu5g00783 338 MobiDBLite consensus disorder prediction 1 50 - -
Lapu5g00783 338 FunFam Basic leucine zipper 61 203 276 - -
Lapu5g00783 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Lapu5g00783 338 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00783 Lapu-Chr5 7855628 7858807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00783 1 282 bZIP Transcription Factor Family AT3G58120 54.693 1.11e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g00783 bZIP_2 1.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00783 - - gmx:100815433 492.271