Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00772 ATGACTCAGTGCAGTTACCCTGAAAACAACCATACCATCCTTGTGGAGAGGCACAAAGATAGCTTGATCAGAACATGTCCTACATGTGGTCATCATATCAAATGTCAGGAGCAGGCTGCTGGAATTCATGACTTGCCTGGACTTCCTGCTGGAGTAAAGTTTGATCCTACTGATCAGGAGATTCTTGAGCATTTGGAAGCGAAGGTGCGCTCTGATATTCACAAGCTTCACCCGTTAATTGATGAGTTCATCCCTACTCTTGAAGGGGAGAATGGAATCTGCTGTACCCATCCAGAGAAGTTACCAGGAGTTAGCAAAGATGGGTTGATCCGACATTTCTTTCACAGGCCTTCCAAAGCATACACGACTGGGACAAGGAAAAGGAGAAAGGTGCACACAGATGCTGATGGCAGTGAAACAAGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTTCATCAGTGGCAAGTTAAAAGGGTACAAGAAAATTCTTGTGCTTTACACTAACTACAGAAAACAAAGGAAGCCTGAGAAAACAAACTGGGTCATGCATCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTGGTAGTCTCCAAAGTTTTCTATCAAACACAGCCTAGACAATGTGGTTCACTCATGAAAGACTCATATCCTGCAAAAATAAATGGTGAAAGTGTGCATGAGGTAACTAATCATAAAAGCACTGGGTTTGTCGAGTACTACAATAATTCTTTTGTATCCTTTGATCAAGGGGACCAGCATAGGTCTAGCAGTGCACAACTAGTCACCCATTTCCCTGTCCATGATGGTGCTACTTTCATTCCTTGA 840 0.4369 MTQCSYPENNHTILVERHKDSLIRTCPTCGHHIKCQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVFISGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKDSYPAKINGESVHEVTNHKSTGFVEYYNNSFVSFDQGDQHRSSSAQLVTHFPVHDGATFIP* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00772 279 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Lapu5g00772 279 MobiDBLite consensus disorder prediction 121 143 - -
Lapu5g00772 279 FunFam NAC domain-containing protein 73 57 211 - -
Lapu5g00772 279 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
Lapu5g00772 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 231 IPR044799 GO:0003700
Lapu5g00772 279 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Lapu5g00772 279 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Lapu5g00772 279 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00772 Lapu-Chr5 7735971 7738781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00772 24 224 NAC Transcription Factor Family AT4G28500 80.198 4.50e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu5g00772 NAM 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00772 - - gmx:100791648 567.77