Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00769 ATGCGGTCGAAGAGGGTGCGAGGGCTGGCAGAGCTGGAGAACGATGATGGAGGTTTGGGCGTCCTGGAAGGCGTCGACGATTTTAAGAATGTTGGGGTGGGGAGAGAGGAAGGTCATGACTTTGGCCTCCATTTCAAGGCAGTGGTGGTCGGTGGCGTCGGTGAGGAGGCGGTTGTTGATGAGTTTGAGAGCGTAGAATTGGTCGATACCAACGCCGACCATGACAACCTCAGGGCGGCTTTCATGAAGCTCAGCTTGAAATGGCACCCCATTAAGCACCCTGACAACGTAAACGAAGCTCAATCCAAATTCGAACAAATCTGCGAAGCATACGAGGTGTTGATTGACCCTGAGAAGAGAGCTGTGTACGACAAATATGGGGAAGAGGTCGTGAAGGGTCAGGTGCCACCTCCTTCTGATGCTTCTGGTGATGCTGCGACGACACCGTTTCGTTTCAATCTCCGTAGTGCTGAGGAAATATTTGCTGAGTTTTATGGAATTTCGACACCGTTTACGTTTGTGGGCTTGCCAATATGGATGGCAATGGCAGGGGAACCATTTGTGGATTTTCTTTAG 576 0.5104 MRSKRVRGLAELENDDGGLGVLEGVDDFKNVGVGREEGHDFGLHFKAVVVGGVGEEAVVDEFESVELVDTNADHDNLRAAFMKLSLKWHPIKHPDNVNEAQSKFEQICEAYEVLIDPEKRAVYDKYGEEVVKGQVPPPSDASGDAATTPFRFNLRSAEEIFAEFYGISTPFTFVGLPIWMAMAGEPFVDFL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00769 191 Gene3D DnaJ domain 67 172 IPR036869 -
Lapu5g00769 191 SMART dnaj_3 60 119 IPR001623 -
Lapu5g00769 191 Pfam DnaJ domain 68 124 IPR001623 -
Lapu5g00769 191 PRINTS DnaJ domain signature 99 119 IPR001623 -
Lapu5g00769 191 PRINTS DnaJ domain signature 119 138 IPR001623 -
Lapu5g00769 191 PRINTS DnaJ domain signature 81 96 IPR001623 -
Lapu5g00769 191 PRINTS DnaJ domain signature 63 81 IPR001623 -
Lapu5g00769 191 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Lapu5g00769 191 CDD DnaJ 68 116 IPR001623 -
Lapu5g00769 191 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Lapu5g00769 191 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 2 68 172 IPR043183 GO:0030544|GO:0051082|GO:0061077
Lapu5g00769 191 SUPERFAMILY Chaperone J-domain 68 139 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00769 Lapu-Chr5 7697027 7701543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00769 75 131 C2H2 Transcription Factor Family AT1G74250 34.426 4.77e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00769 K09510 - mof:131143511 137.887