Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00768 ATGGGTGTTGATTACTACACAATCCTTGAGGTCGATAGGAATGCTAAAGAAGAGGAGCTGAAGAGATCATTCAGAAGACTGGCCAAGAAATGGCACCCCGACAAAAATCCGACAAAGAAGGAAGAGGCTGAATCGACGTTTAAACAAGTATTTGAAGCGTATGAGGTGTTAAGTGATCCCCGCAGGAGGGCTTTTTTTGACAAATATAGTGGAAAGGGTCTTAAAGGTCAGGTGTCACCTCCTGATGCTGGTGCTTCTCATCGTGGTGTTTTTCATGGTGGTGCTTCTCGTGGTGGTGGTGGTGGTGGTGAAGGAGATGCGTGTAGGCCTTCCGGGGGAGGAGGAGAAACCCATGCGAGTCATGGTGGTCCCCGCAAAGCTGCTCCTATTGAGACGAAGTTGCGCTGTACACTTGAGGAGCTATACAAAGGTACCACCAAAAGGATGAAGTTAACTCGGGACATTGTTCAGGCCTCTGGTCACATGCAGCTGAATTGTGGTTGTGGAGAATCCAAAACCCTTGATGTTGTGGCTGAAATTGCAGTTGTCAACAGAAAACATAGGCTGGAGGAAGAGATCTTGGAAATCAATGTGAAGGCTGGTTGGAAGAAGGGCACCAAGATCACCTTTCCAGAGAAGGGAAATCAACTGCCAAATGTGATACCAGCTGATATTGTTTTCATCATAGATGAAAAACGTCATGGAGTTTATACTAGAGATGGAAATGACCTTGTGCTCACCCAGAAGATATCTCTTGTGGAAGCCTTGACAGGCTACACTGTGAACCTGGTCACATTTGATGGAAGAAACTTAACTGTGCCAATCGACCAAATTATTCATCCTGAATATGAGGAAGTTGTTGCTGGAGAAGGATATCCTATCTCAAAGGATCCAACAAAGAAGGGAAACTTGAGGATAAAGTTCAAAATCCAATTCCCAACTCCGCTCACCCTTGACCAGAAGGTCGGAATCAAGAAACTTTTGGCTGCTTCAGATGCACATGTTCATTGA 1011 0.454 MGVDYYTILEVDRNAKEEELKRSFRRLAKKWHPDKNPTKKEEAESTFKQVFEAYEVLSDPRRRAFFDKYSGKGLKGQVSPPDAGASHRGVFHGGASRGGGGGGEGDACRPSGGGGETHASHGGPRKAAPIETKLRCTLEELYKGTTKRMKLTRDIVQASGHMQLNCGCGESKTLDVVAEIAVVNRKHRLEEEILEINVKAGWKKGTKITFPEKGNQLPNVIPADIVFIIDEKRHGVYTRDGNDLVLTQKISLVEALTGYTVNLVTFDGRNLTVPIDQIIHPEYEEVVAGEGYPISKDPTKKGNLRIKFKIQFPTPLTLDQKVGIKKLLAASDAHVH* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00768 336 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lapu5g00768 336 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lapu5g00768 336 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lapu5g00768 336 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lapu5g00768 336 Pfam DnaJ domain 4 67 IPR001623 -
Lapu5g00768 336 Pfam DnaJ C terminal domain 130 313 IPR002939 -
Lapu5g00768 336 Gene3D - 129 233 - -
Lapu5g00768 336 CDD DnaJ 4 59 IPR001623 -
Lapu5g00768 336 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 328 - -
Lapu5g00768 336 Gene3D DnaJ domain 2 81 IPR036869 -
Lapu5g00768 336 SMART dnaj_3 3 62 IPR001623 -
Lapu5g00768 336 FunFam Dnaj homolog subfamily b member 166 232 - -
Lapu5g00768 336 SUPERFAMILY Chaperone J-domain 3 94 IPR036869 -
Lapu5g00768 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 124 240 IPR008971 GO:0006457|GO:0051082
Lapu5g00768 336 CDD DnaJ_C 128 316 - -
Lapu5g00768 336 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lapu5g00768 336 Gene3D - 234 314 - -
Lapu5g00768 336 MobiDBLite consensus disorder prediction 76 129 - -
Lapu5g00768 336 FunFam DnaJ subfamily B member 13 234 314 - -
Lapu5g00768 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 237 321 IPR008971 GO:0006457|GO:0051082
Lapu5g00768 336 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00768 Lapu-Chr5 7677970 7680545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00768 5 74 C2H2 Transcription Factor Family AT1G74250 39.189 1.27e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00768 K09510 - gmx:100778672 385.185