Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00765 ATGCTGGCTGTGTCACCTTTGAGGAGCACAAGAGATGAAGAGCAAGGGGAGATGGAGAGTTTCTCCATTGGAACTGATGACTTTGCTGACCTTTCAGAAGGAAACTTGCTCGAAAGCATCAACTTTGATGATCTTTTTATGGGAATCAACGATGATGAAGATGTCTTGCCGGATCTGGAAATGGACCCTGAAATGCTTGCTGAGTTTTCCCTCAGTGAGGAATCAGAGATACTCTCATCAGTTTCAGTGGCAAATAGCAAATCTGTCAGCGGGAATGAGAACAATATAGTTACTACAGAGAAACAAGATGAGGTTATAGCAGCCAATTTTTCTTCAGATTCTGGTTCCAATTCGGGGTCTAGTCGAGGGGACGAGATACCAAGCAAAAGTGATGAATCAACTCATTCAGTGGTTGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAATCATCAACGCATTCAAGGAATAATCCGCAAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAGCTAGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAAATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCCCATAGGAAGCATTTGCTAGCACGTGAAGCTGAAGCAGCAAGGTGGAGTCAAAGGAAACAATTCATGGGTGCAGCAAGTGTAGGTAGAGGAGCAGGCAAGAGAGACATGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCCCATGACACCAATGCACCATTTTAGACCTTTACATGTATGGGGTCATCACGCCATGGACCAGTCCTTCATCCACATGTGGCCTAAACATCTCCCATATTCACCTTCTCCGCCAGCATGGCCACCGCGAACAGCTCCATCTCCGCCGCCTCCGGACCCTCTTTATTGGCACCAACACCAACGGGCTCCAAATGCACCAACTCCAGGAACACCGTGTTTTCCACAGCCTCTGACAGCCACGAGATTTGGTTCTCAAACTGTTCAGGGCATCCCACCACCCCATGCAATGTACCAAATAGTAGATCCAGGCATTGGCATCCCAGCCACCCAGCCGCCACCTCGACCCCTCCTCGATTTTCATCCGTCAAAGGAGAGCGTAGATGCGGCTATTAGTGATGTTTTATCAAAACCATGGTTGCCACTGCCACTTGGCCTTAAAGCTCCAGCACTTGATGGTGTAATGGGTGAACTACAAAGACAAGGAATTCCCAAAATCCCTCCCTCTTGTGCTTGA 1308 0.4809 MLAVSPLRSTRDEEQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGINDDEDVLPDLEMDPEMLAEFSLSEESEILSSVSVANSKSVSGNENNIVTTEKQDEVIAANFSSDSGSNSGSSRGDEIPSKSDESTHSVVVNPSPKESEKGRKSSTHSRNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARWSQRKQFMGAASVGRGAGKRDMNPWLAPTMGFPPMTPMHHFRPLHVWGHHAMDQSFIHMWPKHLPYSPSPPAWPPRTAPSPPPPDPLYWHQHQRAPNAPTPGTPCFPQPLTATRFGSQTVQGIPPPHAMYQIVDPGIGIPATQPPPRPLLDFHPSKESVDAAISDVLSKPWLPLPLGLKAPALDGVMGELQRQGIPKIPPSCA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00765 435 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 434 IPR044825 GO:0003700|GO:0045893
Lapu5g00765 435 Pfam Myb-like DNA-binding domain 168 217 IPR001005 -
Lapu5g00765 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 165 219 IPR006447 GO:0003677
Lapu5g00765 435 MobiDBLite consensus disorder prediction 110 169 - -
Lapu5g00765 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 221 IPR017930 -
Lapu5g00765 435 FunFam Two-component response regulator 161 224 - -
Lapu5g00765 435 SUPERFAMILY Homeodomain-like 163 222 IPR009057 -
Lapu5g00765 435 Gene3D - 162 223 - -
Lapu5g00765 435 MobiDBLite consensus disorder prediction 1 25 - -
Lapu5g00765 435 MobiDBLite consensus disorder prediction 110 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00765 Lapu-Chr5 7629841 7634085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00765 27 386 G2-like Transcription Factor Family AT5G44190 40.584 1.54e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu5g00765 Myb_DNA-binding 5.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00765 - - gmx:100790591 676.396