Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00753 ATGGTTGCCACTCAAGGATTGGAGTTTTCTTTGTGCAAGAGGAGGAGGAGGCTTGGATTTTTGTTTCAGATTGCATTTGGGTGGTGGGTGGTTCTCCTGTTAATTAATCCTGTTTCGGGTCTCAGACCCTTGAGGGAGAGAACTAGGTCCTGGGATGATGAGCAGCTGTTTACAAGAAAGGATGAGAGTAACTTCGGTCCATTTTCACAATGGAACATAACAGGAACTTACAAAGGGACTTGGAAATTTTTGGATACCACAAATGGCTCTTCCAGGTTTCCAGACGTCAGCAAAACAAATGGCAATTCTGTAATTGAGTTAGTTAGTACTCCGACAAAGATAAGTGGAGTACATTATGTTCAGGGGGTGGTTATATTCCATGATGTGTTTGACAATGAATACGATGTCAGTGGTGCCCAAATAAGAATAGAAGGTGTATACATATGGCCTTTTAGACAGCTTCGAATGGTCGCCAACAGTGGAAAAGAAGGGGAATTGAATCAGAATGACGATTATATTCTATCTAATCCTTATCATCTGCTTGGAGTTTTCTCATCTCAGGTACTGCAAGATTCTTCGCGAGATAAAATGTGGAGAAGAAAACATTCTCTGATTCATGACACGGAGAAACATTGTAATGTGGAAATTGCTGCTCAGGTTTCACGCTTGCCATCATCAAATAATGAAGGTGAACATGATCATTTTCATTTAGAAGGGTTAATGGAGAGCCCCTCTGCGGATGATGATGGGGACTGCTTCTCACCATTACTGTTAAATGCAACGTCTGTCAAAATTGAGGTCTACTATAACAAAGCAGTGAACTATACCTTGATGGTTACTTTTGTTTCTTTCTTGCAAGTCCTTCTATTAATTCGTCAAATGGAGCATAGCAGCACTCAATCTGGTGCTGCCAAGGTTTCAATACTAATGATTGGCCAGCAAGCAATAATGGATGCCTATCTTTGCCTTTTACATCTCACCGCAGGAATACTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTTGTAGTCTTCTCAATATTTGAGATGAGATACCTCCTTGCAATCTGGAAGGCGAGTAGGCCTTTGAGTAATGGTGAAGGTTGGGAAACAATGAGGCGAGAACTTTCAGTTTTATACAGTCGTTTCTATGGCATCTTGTTGGGAGGCATTCTACTCATGTACGAGTTCCATAATTATTTGAGACCTATTCTTCTTCTTGTGTACTCTTTTTGGATACCTCAAATAATCACCAATGTTATTCGTGATTCACGCAAACCATTGCATCCTCATTATATCTTAGGGATAACTATCACTAGGCTAGCAATCCCATTATATATTTTTGGTTGCCCTAACAACTTCATGCGCATAGAACCAGACAAGAGCTGGTGTGTTTGTTTGACTGTATTTATTGGACTTCAAGCTGCAATTCTCCTACTTCAGCACTATCTTGGGTCACGTTGTTTCATTCCTCGTCAGATTCTCCCTGAGAAATACAGCTACTATAGGAGGTTTGATCAAGAAACAAGACATGCTACTGACTGTGTGATTTGCATGACAGCCATTGATCTTTCCCAGCGATCTAATGATTGCATGGTGACACCTTGTGATCATTTCTTCCACTTTGGGTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGTCCAACTTGCCGGCGCCCATTACCCCCTGCCTAG 1713 0.4098 MVATQGLEFSLCKRRRRLGFLFQIAFGWWVVLLLINPVSGLRPLRERTRSWDDEQLFTRKDESNFGPFSQWNITGTYKGTWKFLDTTNGSSRFPDVSKTNGNSVIELVSTPTKISGVHYVQGVVIFHDVFDNEYDVSGAQIRIEGVYIWPFRQLRMVANSGKEGELNQNDDYILSNPYHLLGVFSSQVLQDSSRDKMWRRKHSLIHDTEKHCNVEIAAQVSRLPSSNNEGEHDHFHLEGLMESPSADDDGDCFSPLLLNATSVKIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILLMYEFHNYLRPILLLVYSFWIPQIITNVIRDSRKPLHPHYILGITITRLAIPLYIFGCPNNFMRIEPDKSWCVCLTVFIGLQAAILLLQHYLGSRCFIPRQILPEKYSYYRRFDQETRHATDCVICMTAIDLSQRSNDCMVTPCDHFFHFGCLQRWMDIKMECPTCRRPLPPA* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00753 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 506 570 IPR013083 -
Lapu5g00753 570 PANTHER RING ZINC FINGER PROTEIN 118 569 - -
Lapu5g00753 570 SMART ringv_2 519 564 IPR011016 GO:0008270
Lapu5g00753 570 CDD RING-H2_TUL1-like 514 569 - -
Lapu5g00753 570 ProSiteProfiles Zinc finger RING-type profile. 520 564 IPR001841 -
Lapu5g00753 570 SUPERFAMILY RING/U-box 504 569 - -
Lapu5g00753 570 SMART ring_2 520 563 IPR001841 -
Lapu5g00753 570 Pfam Ring finger domain 519 564 IPR001841 -
Lapu5g00753 570 FunFam E3 ubiquitin-protein ligase, putative 506 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00753 Lapu-Chr5 7475912 7485506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00753 513 569 C3H Transcription Factor Family AT2G17450 35.088 3.86e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00753 K23788 - gmx:100780140 1081.24