Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00745 GTACAACAGCTTCAGAGAAGTCAACCTTCTTCAACCAAAGTCGAAAGAAAGATTGTAGAGAAAAACAGGCGAAACCATATGAAGAATCTTTATTCTGAACTCAGCTCTCTTCTCCCTAGTTATAATCCCAAGCAAGTGGTGGCACTGCCTGATAAAATAGATGAAGCAACGGAGTACATCAAAAGACTAGAGGCAAAAGTTAAGATGGCGAAGGAGAAGAAAGAAAGGTTAATGGAAACGAAGAGAACTCGAACTGGTTTCTCGAGTGGTCTTGAATCACGAGGAAGCCTAAAACCGCCAAAAATGGAGATTCATGAAACGGGTTCTGTGCTTCAAGTCATTCTAACATGTGGGGTCGACAACCACTTCGTTTTCTGTGAAATTATTAGGATATTGCATGAAGAGAATGTTGAGGTAATCAGTGCCAGTTCTTCAGTTGTTGGAGATTCAGTGTTTCATGTTGTGCACGGAGAGGTTGGGCGATCTATGTTCCAATCTGGAGCTAGCAAAGTGAGTGAGAAGCTGAAATGGTTCGTAAATGGATCCATCTGTGATGTAGAAATGGAGCCTGGAATATTTTGGGATTCT 588 0.4167 VQQLQRSQPSSTKVERKIVEKNRRNHMKNLYSELSSLLPSYNPKQVVALPDKIDEATEYIKRLEAKVKMAKEKKERLMETKRTRTGFSSGLESRGSLKPPKMEIHETGSVLQVILTCGVDNHFVFCEIIRILHEENVEVISASSSVVGDSVFHVVHGEVGRSMFQSGASKVSEKLKWFVNGSICDVEMEPGIFWDS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00745 196 FunFam Transcription factor bHLH162 5 89 - -
Lapu5g00745 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 81 IPR036638 GO:0046983
Lapu5g00745 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 177 - -
Lapu5g00745 196 Coils Coil 53 80 - -
Lapu5g00745 196 SMART finulus 17 69 IPR011598 GO:0046983
Lapu5g00745 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 63 IPR011598 GO:0046983
Lapu5g00745 196 Pfam Helix-loop-helix DNA-binding domain 13 64 IPR011598 GO:0046983
Lapu5g00745 196 Gene3D - 2 87 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00745 Lapu-Chr5 7350461 7351441 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00745 11 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.458 5.51e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu5g00745 HLH 7.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00745 - - gmx:100784042 263.462