Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00742 ATGCAGGGAGGAGAATTATCACGTGGTGATCTAATCGATGAGGCTACCAGCTACATCAAGAACTTAGAGACAAAGCTGAAGATGGCACAGCAGAAGAAAGAAAGCTTAATACAAAGTAAGAGATCTCGAAGTAGTGGCTGTTCCAGTACTTCTGAAGCACCAAAAATTGAGATTCATGAAATGGATTCCTCTCTACAAATCATTCTGTCGTGTGGACTTCACAACCAGTTCATTCTGAAAGAAATCATTCGCATTCTGCAGGAAGAGACCATAGAGGTCGTGAGTGTTCATTCTTCACTCTCTGGAAACTCAATGCTACATGTTGTGAAAACACAACAACCAACAGCCACAATCAGTGACAGACTGAAAAGGTTTGTGAACGAACATGGGGAGAACTCTTAA 402 0.4154 MQGGELSRGDLIDEATSYIKNLETKLKMAQQKKESLIQSKRSRSSGCSSTSEAPKIEIHEMDSSLQIILSCGLHNQFILKEIIRILQEETIEVVSVHSSLSGNSMLHVVKTQQPTATISDRLKRFVNEHGENS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00742 133 Coils Coil 12 39 - -
Lapu5g00742 133 MobiDBLite consensus disorder prediction 33 55 - -
Lapu5g00742 133 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00742 Lapu-Chr5 7284893 7285453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00742 6 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 28.369 9.45e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00742 - - pvu:PHAVU_005G102700g 187.193