Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00725 ATGGCTGCAACGAACAGTGGGAAATTCGATGTGGGAGATGAAACTCAGGATTGTTCCCAGAAGGGAAGTGAAAGCAAAGATTGGGAGATCGAAAAGGGAAAGGGCGTGGGTTCAACCACTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCGTTTCACACAATAGACCTCTGAAGAAAATCCGCAGCCCCGATCGCCATAACACAAACCAATCGTCTTCCTCTTCCTCTTCTTCTTCTGTTCCTTTTCAGCCTTCTCCTCTCTCTACCCCTCCTTCATCCTCTTCAAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAACACCCAATGCAATTCCCTTACCAATTCGGAGCCACAAATTCACCTTTCCCTCACCCCTCTTTCCAAAACCACCAACAACAGATGATATCATTCGGGTCCCAACAGCAAAACCTTCCCTTTCCACCAATCATGGCCCGAGACTCTTCTCTTCCACACCACCACCATCATCAACAACATCCGCAGCAACTTCTTCAGCATTGGAGCGACGCTCTGAATCTAAGTCCCAGAGGAATGTTCACCCACTTGGGGCCAGATGGAAGGCCATTGTTTAGGCCTCCAACGCAGCCCATAAACACCACCAAGCTCTACAGAGGAGTGAGGCAACGTCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGCTAGGCACATTCGACACGGCGGAGGACGCAGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGACTCAATTTCCCCGAAATGTTCCAAAACAAGGACAAAAACGAACAAGTTCAAGAGGAACCTTCTTCTCCTCTTCAAAACCAGCATGAACATAAACCTGTTCTTGTAGGCCGTGACATGCCAAGAGAAGAGTCTAATGAGAATGACTCGGGAATTGGATCAAGTGACGCCACTGTGAGCGATGAGGTTCATCATGCTGCTGCTGCAGAAGTAGGTGAAGGGGTTTCTCAGGAACTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCTGGTAGCCCTGTGTGGGATGATTTGGATCCCACCAATAATCTTCTCTACCAATCACACGTTCCTTTTTCAAATTCCAATCAGCAAGAGTTCAGCGATGCTAGTAACGATGCTCAGAGACATGAACATAACACGGGACCAGGTTACTTGTGGAAGGATCAGGATTGA 1248 0.4872 MAATNSGKFDVGDETQDCSQKGSESKDWEIEKGKGVGSTTQRRQWKPVFDDTSVSHNRPLKKIRSPDRHNTNQSSSSSSSSSVPFQPSPLSTPPSSSSRIVFPFAFNGSQHPMQFPYQFGATNSPFPHPSFQNHQQQMISFGSQQQNLPFPPIMARDSSLPHHHHHQQHPQQLLQHWSDALNLSPRGMFTHLGPDGRPLFRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPEMFQNKDKNEQVQEEPSSPLQNQHEHKPVLVGRDMPREESNENDSGIGSSDATVSDEVHHAAAAEVGEGVSQELVWGEMSAWFNAIPAAWGPGSPVWDDLDPTNNLLYQSHVPFSNSNQQEFSDASNDAQRHEHNTGPGYLWKDQD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00725 415 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 26 369 - -
Lapu5g00725 415 SMART rav1_2 212 275 IPR001471 GO:0003700|GO:0006355
Lapu5g00725 415 FunFam Ethylene-responsive transcription factor 2 211 270 - -
Lapu5g00725 415 ProSiteProfiles AP2/ERF domain profile. 212 269 IPR001471 GO:0003700|GO:0006355
Lapu5g00725 415 MobiDBLite consensus disorder prediction 276 323 - -
Lapu5g00725 415 SUPERFAMILY DNA-binding domain 212 270 IPR016177 GO:0003677
Lapu5g00725 415 MobiDBLite consensus disorder prediction 37 51 - -
Lapu5g00725 415 MobiDBLite consensus disorder prediction 1 96 - -
Lapu5g00725 415 Pfam AP2 domain 213 261 IPR001471 GO:0003700|GO:0006355
Lapu5g00725 415 MobiDBLite consensus disorder prediction 14 33 - -
Lapu5g00725 415 Gene3D AP2/ERF domain 212 271 IPR036955 GO:0003700|GO:0006355
Lapu5g00725 415 PRINTS Ethylene responsive element binding protein signature 235 251 IPR001471 GO:0003700|GO:0006355
Lapu5g00725 415 PRINTS Ethylene responsive element binding protein signature 213 224 IPR001471 GO:0003700|GO:0006355
Lapu5g00725 415 MobiDBLite consensus disorder prediction 384 415 - -
Lapu5g00725 415 MobiDBLite consensus disorder prediction 296 310 - -
Lapu5g00725 415 CDD AP2 211 270 IPR001471 GO:0003700|GO:0006355
Lapu5g00725 415 MobiDBLite consensus disorder prediction 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00725 Lapu-Chr5 7091216 7092869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00725 51 385 AP2-EREBP Transcription Factor Family AT2G20880 43.695 7.56e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu5g00725 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00725 - - gmx:100809887 615.535