Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00719 ATGGGCTGTTGTGTCTCAACAAGTAGTCAGAGCACTCGTAGTCGCAGGAGCACTGGGGACACAAACGTTCCGACGTGTCTAGAAATAGGATTCTGTGGTCAAAAGAGTGCAAGGAGAACATTCTCTGATCATGTTGTCTCTCTGCACCAATTACCATCCTTACCCAACAGAATTTTCACCAATGGAAAGAGCAGGTCTTCTTGCATATTTACACAGCAGGGTCGTAAGGGTATTAATCAGGATGCCATGATTGTATGGGAAGATTTCATTTCAGAAGATGTGACCTTTTGTGGTGTATTTGATGGCCATGGTCCACACGGTCACCTTGTTGCACGCAAAGTTCGGGAAGCCTTGCCACTCAAACTGCTTTCATTTTTGCATTCCTCCGAATCAGGGCAAAATGGTTCAGGTAAAACTTGTTTCAGAGGCAGCTTGAAGCCCGAAAGTGGAGAGTCTGAAAAAGATGCCACTGTTGAAGATAAACTGAGTTCCATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTCACTGTTGTGAAACAGGGTTCAAATTTATTCATGGGCAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGGCGTCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCTGATTTGCCAAGAGAAGCTGAAAGAATCAAACGATGCAAGGGTAGGGTATTTGCATTACAAGATGAGCCAGAAGTTCACAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAATACGGTGTGATTTCTATACCTGAGTTTTCTCATAGGTTATTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCAGATGGGATCTGGGATGTTTTAAGCAACGAAGAGGTGGTTGGGATAGTATCTTCAGCACCAACTCGATCAGCAGCAGCAAGGATTCTGGTGGATTCCGCGGCTCGAGAGTGGAAACTTAAATATCCTACTTCAAAAGTGGACGACTGTGCTGTTGTGTGCCTATTTCTGGATGGAAAAATTGATTCAGAATCCGATTGTGATGAGCAATGCTTCTCTTCTGCTATCATTCAGAGCAATCCGGTTGAGACAGATGATGATCAAAAGTTGGAGCCAACTTTGCAAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGCCACCTATGGAGGAAGAGGAGGAGTATCTGTTGATGTTGTTGAAGATGGAACATCAGGGGCTGAAGATCAAAACTGGTTAGGATTGGAGGGTGTGACCCGAGTAAACTCACTGGTTCAACTCCCTAGATTTTCTGCGGAAAAACCAAACTGTTGA 1413 0.4423 MGCCVSTSSQSTRSRRSTGDTNVPTCLEIGFCGQKSARRTFSDHVVSLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFISEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGQNGSGKTCFRGSLKPESGESEKDATVEDKLSSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTVVKQGSNLFMGNIGDSRAIMGSKDSNGVMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGIWDVLSNEEVVGIVSSAPTRSAAARILVDSAAREWKLKYPTSKVDDCAVVCLFLDGKIDSESDCDEQCFSSAIIQSNPVETDDDQKLEPTLQRNFTVRSSEENATYGGRGGVSVDVVEDGTSGAEDQNWLGLEGVTRVNSLVQLPRFSAEKPNC* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00719 470 CDD PP2Cc 65 370 IPR001932 -
Lapu5g00719 470 Pfam Protein phosphatase 2C 92 346 IPR001932 -
Lapu5g00719 470 MobiDBLite consensus disorder prediction 1 20 - -
Lapu5g00719 470 Gene3D - 57 372 IPR036457 -
Lapu5g00719 470 SMART PP2C_4 55 368 IPR001932 -
Lapu5g00719 470 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Lapu5g00719 470 FunFam probable protein phosphatase 2C 52 57 373 - -
Lapu5g00719 470 PANTHER PROTEIN PHOSPHATASE 64 368 IPR015655 GO:0004722|GO:0006470
Lapu5g00719 470 MobiDBLite consensus disorder prediction 131 157 - -
Lapu5g00719 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00719 Lapu-Chr5 6996690 7001415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00719 1 468 PP2C-type Phosphatase Gene Family AT1G03590 69.280 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00719 - - gmx:100777448 838.565