Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00713 ATGGTTTTCATCTCGAGGTTTTCAGCATTACTTCTCAACCTTGTTCAGTTTTTCTCCTACAAGAGGATGGTAAGGCGATTGGTTTCAAGGGAAAGGAATGAGCAGAAGATTAACATTGAGCTTCAAAGAATGGGTGAGAAGAGATCTGGTGCACAGTACAAGAGAGTGAAGATCCATGGGAAAGTTCTATTGGGATTTCTGTTGATCTTCATAGTCCAGTTTTCACATGCAGACACTGATCCTTCTGATGTTGCAGCGATAAATAATTTATATACTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTCCTAGTGCAGGTGACCCGTGCGGACAAGCGTGGCAAGGTGTTCAATGTAATGGTTCAGTCATACAAGCAATAACTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGACAGCTTAGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGAGGAAGTATTCCATCCAGTTTGCCAGTCACTTTGCAACACTTCTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCAGCCTCTTTATCCACGTTGACTGAATTGACTGACATGTCTCTTAATGAAAATCTTTTAACGGGAGAAATACCAGATGCATTTCAGTCTCTTACTCAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTATGGAGAATTTGTCAGCTCTGACCACCGTACATTTACAGAACAATAACTTATCTGGGACCCTGGATGTTTTACAAGACCTTCCACTGCAAGATTTGAATGTTGAAAACAACCAGTTTGTTGGACCAATACCCCCAAAGCTGTTAAGCATCCCTAACTTCAGAAATGATGGAAACCCGTTTAATCTTAATGTCAATGCTACTATAGCCCCAGCACGTCCACCTCATTCTCCAGTGACGGTATCGCCATCAGGAACTGTGGTTTCTGTGACACCATCATCTGGACGTTTACCTACTAAACCTTCTGATGGACCAACTGTAGCAAGGGAATCAAATTCTGGGAAATCGGAAAAGAACACCAAAAGGGTGGTTTGGATATCTATTTCTGGTATATTGATGTTTATAATTGTAGTACTGGGACTTCTTCTCTTTGTTCCAAGATGTAGCAGAAGAAGAGAACAGGTTAACATAAGTTCCAAGCAACATCAAGTGGGTACATATGGAGGTGAAAGACAGAATCCAAGAGAATATGAGGCTTTTGTCCAACTACCTAGTCAAACTGAGAAAGTAGTACCAAAAGGTGCTGTTGCGAGGCCGAAAGGGGATCATCAAGAGGAGGCAAGGAGAGTGAGGGCAATTCCAAAGCTACAAGGCGAGCAAGAGAAGGATGAACAAAGAAAGGGAACAATCCCAAAGCTGTTAGATCATGAGATAGATATGAGTTCACTAGATGTATATTCCATGCCTTCCCCACCGCCACCTCCTCCACCTCCAACACTTACTAGTGAGAGTGTGATTATTGAACCAACCTCATTCCACAAAGGGGCCAACTTCAATCCTCCCAAAAAAAGTCTGGTTCCGCCCACTTTTGCGAAAACTTTCACGATTGCATCCCTCCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGAATGCTGGGGACTGTGTATAAGGCGGAGCTTCCTGATGGAAAGGTACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAACAGATGATGAATTTCTTGATTTGATAAACAACATTGACAGAATACGGCATGCAAATATTGTTGAGCTTATTGGATACTGTGCAGAGCATGGTCAAAAGCTTCTAATTTATGAGTACTGTAGTAATGGTTCGCTGCAGGATGCACTCCATTCAGATGACGAATTCAAAACAAGACTATCATGGAATGCTCGCATTCGGATAGCACTAGGTGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTCAGCCACCTGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTCTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAGCAGCTTATGGCTATGGAGCTCCGGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAGCTTTTGACAGGCCGTCAGTCCTTCGACAGAACACGAGCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCTCAACTGCATGACATTGATGCATTATCAAAGATGGTTGATCCTTCTCTAAAAGGAGATTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTTGTCTTGTACTTGATAAATATGATCAGGAAGGAATCTCAGCAAAGTGAATGA 2481 0.4204 MVFISRFSALLLNLVQFFSYKRMVRRLVSRERNEQKINIELQRMGEKRSGAQYKRVKIHGKVLLGFLLIFIVQFSHADTDPSDVAAINNLYTALGNPVLPGWVPSAGDPCGQAWQGVQCNGSVIQAITLNGANLGGELGDSLGSFVSIRAIVLNNNHIGGSIPSSLPVTLQHFFLSDNQFTGSIPASLSTLTELTDMSLNENLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTTVHLQNNNLSGTLDVLQDLPLQDLNVENNQFVGPIPPKLLSIPNFRNDGNPFNLNVNATIAPARPPHSPVTVSPSGTVVSVTPSSGRLPTKPSDGPTVARESNSGKSEKNTKRVVWISISGILMFIIVVLGLLLFVPRCSRRREQVNISSKQHQVGTYGGERQNPREYEAFVQLPSQTEKVVPKGAVARPKGDHQEEARRVRAIPKLQGEQEKDEQRKGTIPKLLDHEIDMSSLDVYSMPSPPPPPPPPTLTSESVIIEPTSFHKGANFNPPKKSLVPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGTVYKAELPDGKVLAVKKLDKRVSDHQTDDEFLDLINNIDRIRHANIVELIGYCAEHGQKLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVVHRNFKSANILLDDDVSVRLSDCGLAPLITKGSVSQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSFDRTRARGEQFLVRWAIPQLHDIDALSKMVDPSLKGDYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLINMIRKESQQSE* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00713 826 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
Lapu5g00713 826 Pfam Leucine rich repeat N-terminal domain 81 120 IPR013210 -
Lapu5g00713 826 Gene3D Transferase(Phosphotransferase) domain 1 618 826 - -
Lapu5g00713 826 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 80 306 - -
Lapu5g00713 826 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Lapu5g00713 826 ProSiteProfiles Protein kinase domain profile. 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00713 826 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 507 617 - -
Lapu5g00713 826 SUPERFAMILY L domain-like 79 287 - -
Lapu5g00713 826 Gene3D Phosphorylase Kinase; domain 1 510 617 - -
Lapu5g00713 826 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 618 826 - -
Lapu5g00713 826 Pfam Protein tyrosine and serine/threonine kinase 543 812 IPR001245 GO:0004672|GO:0006468
Lapu5g00713 826 Gene3D Ribonuclease Inhibitor 80 303 IPR032675 -
Lapu5g00713 826 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 119 811 - -
Lapu5g00713 826 MobiDBLite consensus disorder prediction 308 353 - -
Lapu5g00713 826 MobiDBLite consensus disorder prediction 313 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00713 Lapu-Chr5 6909850 6917076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00713 69 825 Strubbelig Receptor Gene Family AT4G03390 61.227 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu5g00713 PK_Tyr_Ser-Thr 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00713 - - gmx:100811490 1302.35