Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00710 ATGGCTGACGTCATCCACGAAGCTGAAGCTGGGGTTGTTGCAGATCCCACCCAGATCGATGTCAAGCTCTTTAACCGTTGGAGCTTTGATGATGTTCAGGTTAACGACATTTCTCTGGCGGATTACATTGGAGTTGTGGCATCCAAGCACGCCACATATGTTCCTCACACTGCTGGTAGGTACTCTGTGAAGCGGTTCAGGAAGGCCCAGTGCCCCATTGTTGAGAGGCTCACCAACTCTCTTATGATGCACGGTAGAAACAATGGCAAGAAACTCATGGCTGTTAGGATCATCAAGCATGCTATGGAAATTATTCATTTGTTGACTGACCTGAACCCCATTCAAGTTATTGTAGATGCTGTCATCAACAGTGGTCCCCGTGAAGATGCAACAAGAATTGGTTCTGCTGGAGTCGTAAGGAGACAGGCTGTGGATATCTCACCCCTTCGCCGAGTTAATCAAGCTATCTATCTTTTAACAACTGGTGCACGTGAAGCTGCGTTTAGAAATATCAAGACAATAGCAGAATGCTTGGCTGATGAACTTATTAATGCAGCCAAAGGGTCGTCCAACAGTTATGCTATCAAGAAAAAGGATGAAATTGAGAGAGTTGCCAAGGCCAATCGTTGA 630 0.4587 MADVIHEAEAGVVADPTQIDVKLFNRWSFDDVQVNDISLADYIGVVASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00710 209 CDD uS7_Eukaryote 22 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lapu5g00710 209 Pfam Ribosomal protein S7p/S5e 63 209 IPR023798 -
Lapu5g00710 209 Gene3D Ribosomal protein S7 domain 5 209 IPR036823 -
Lapu5g00710 209 SUPERFAMILY Ribosomal protein S7 22 209 IPR036823 -
Lapu5g00710 209 NCBIfam 30S ribosomal protein S7 21 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lapu5g00710 209 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 3 209 IPR000235 GO:0006412
Lapu5g00710 209 PANTHER RIBOSOMAL PROTEIN S7 19 209 IPR000235 GO:0006412
Lapu5g00710 209 ProSitePatterns Ribosomal protein S7 signature. 75 101 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lapu5g00710 209 FunFam 40S ribosomal protein S5 5 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00710 Lapu-Chr5 6887992 6891230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00710 20 209 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.158 2.93e-134 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00710 K02989 - gmx:100803239 375.555