Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00693 ATGGCTCACACGAGAGAACTTGATTCAGTGAAGATCATAGAGCGGTGTGAAGTTTCTCCGCCACCAAATTCTCTTCCGTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTACTGCCACTCCATCCAACGCATCCTCTTCTTTGAGTTTCCCCACCCCACTCACCACTTCCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGTCTCCAATCTCATCGTTCCACCACAACTCCATCTCTCTCACATCCGTTACCTTCATGGCGACTCTCTCTCCTTCACCGTTGCAGAGTCCACCGCAGACTTCACCCTCCTCACATCTGATTCTCCTCAAGACGTTCGAAACTGGCACCCTCTTGTTCCCACCTTGCCTTCCCCACGTGTTGAGCAAGATGGCGTACGTGTGTTGCCTCTCATGGCCATTCAAGTCACGGTTTTCCCAAACTCTGGCTTCAGCATATGCCTTACCTTCAACCACCTTGCTGGGGATGGAAAATCACTTCATCATTTCATCAAGTTTTGGGCCTCTCTTTGCAAGGCAAGAGGGGACTTGGCTTCCATTGAAACCTCTTTGTCTCTTCCTTCACACCAGAGAGACAAAGTTGAAGATCCAAAGGGGCTTAAGTTCATTTACTTTCAAGAACTTGAACATTGTGAGTCGAAAAGCATGGAGTTTGCGGGGCTCGTGCGAGATCTTTCCACTAACAAGGTTCGCTTCACTGTTGTACTCAGTCTTGAACAAGTTCAGAAACTAAAGAGATGGGTCTCTCTTAAATGTGCCAGCAACGATTCGGGAACATTACACATATCAACCTTTGTTGTGGCATGCTCTATAATTTGGGTTTGCATGATTAGGTCAGAAGAGAGAAAAGACATTTGTTTTTCACAGGAGTATGACGAACTTTGCCACTTGGTGTTTCTAGCAGATTGTCGTGATCGTCCTGAATTTTCATTACCTTCAACGTACTTTGGGAATTGTCTAACCTCTTACATTGTGGCAATAAAGAGGAGTGAGATAGTGGGAGAAAATGGTACTGTAGAGGCAGCAAACGCCATTGAAAGAGAAATTAGATATTTGAAGAGTGATGCTTTGAGAAATGCTGAAACGTTGATGTCAGATTATAGAGAGATAGGGAAACCAGGTAAATCTGTGTTGGTTATTGCGGGTTCACCGAAATTGGGTGTGTACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAGGCAGCTCATATTGAATCATCAGGATCAATTTCTCTTTCTGATAGTAGAGACGAAAAAGGAGGAATTGAGGTTGGATTGGCGCTTGAAAGGACTCAGATGAACAAGTTTACCAACATCTTAGAAGAGAAACTCCATAATATTAATAAATTCTAA 1422 0.443 MAHTRELDSVKIIERCEVSPPPNSLPSTTLPLTFFDIPWFYCHSIQRILFFEFPHPTHHFLQTALPILKHSLSLSLQHFFPFVSNLIVPPQLHLSHIRYLHGDSLSFTVAESTADFTLLTSDSPQDVRNWHPLVPTLPSPRVEQDGVRVLPLMAIQVTVFPNSGFSICLTFNHLAGDGKSLHHFIKFWASLCKARGDLASIETSLSLPSHQRDKVEDPKGLKFIYFQELEHCESKSMEFAGLVRDLSTNKVRFTVVLSLEQVQKLKRWVSLKCASNDSGTLHISTFVVACSIIWVCMIRSEERKDICFSQEYDELCHLVFLADCRDRPEFSLPSTYFGNCLTSYIVAIKRSEIVGENGTVEAANAIEREIRYLKSDALRNAETLMSDYREIGKPGKSVLVIAGSPKLGVYQTDFGWGKPKKCEAAHIESSGSISLSDSRDEKGGIEVGLALERTQMNKFTNILEEKLHNINKF* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00693 473 Gene3D - 9 241 IPR023213 -
Lapu5g00693 473 PANTHER - 9 468 - -
Lapu5g00693 473 Gene3D - 247 470 IPR023213 -
Lapu5g00693 473 Pfam Transferase family 10 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00693 Lapu-Chr5 6734986 6736407 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00693 37 465 Monolignol Biosynthesis Gene Families AT5G48930 24.722 7.02e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00693 - - gmx:100797294 759.214