Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00691 ATGAATAAGTTTACCAACATTATAATTCTGAATTATTGTCACCAACAAATGGCAGAAGTTAGAGCACATAAACTTGTTGAGAAATCTGAAGTTGCTCCAGCATCACTTCCTAGTTCTACAACAAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTGCCTTTAGCTGGTCCTATTTATGTGAAACGCCAATTCTTCTATCAGTTCTCCCACTCCACACACCATTTTTGTGAAACTACACTCCCCACTCTCAAACACTCTCTCTCTCTTATCCTTCAACGCTTCTTTCCTCTTGCTGGGAATCTCCTTTGTCCTCCACCACCCCACAAACCCTTCATTCGCACCACTAGTGATGACACTGTCACTTTAACCATCGTTGAATCCAAAGCAGATTTCAACCATCTCTCATCCAACCACCCTAAGAGTCTCAAACAATTGGATCTCTTGTTTCCCGAGTTGACATTCACAACCATGCATGATGACACGTTCATTTTCCCGTTAGTGGCATTACAAGCCACGGTTTTCCAAAACCGAGGGCTTTGCATCGCCATCACGTATTGTCATATCATGGATGGTAAGTGTTGCAATCATTTCATGAAGTCTTGGTCTTCCCTTTGTCAACGTGGTGGAGTTGACTTGACACTTTTAGAGAATCCACCACCCTGCTTTGATAGGGAAGTGTTGAAGGACCCTAGAGGACTCGAGGCCTTTTTCTTGAGAGACTATTTCGAAGAGAGATCAACTTGGAAGGACAAGCTCATTGATCAAACTCGTAAACATGTGTGTGATGACAATGAGGAGTATTGTAAGGCGACGATTGTTTTTGGGAAAGATGATATTGAGGGCTTAAGAACACGGGTTCTAGCACAGTGGAAGAAAAATGACGAGTTTAATAACTCACCGCAATATTTGTCAAAATTTGTGGTTGTTTGTGCTCTTGTGTGGGCCAGCTTGGTTAAAACAAGATGCAAATATCGTGATGATGAAGATGACAGAGAAGAATACTTTCGCTTCGCTGCAGATTGCAGAGGCCGTCTTGGTTATCCTATACCAGAAACATACTTTGGAAACTGCTTAACGCTATGTTGTGCCATGTTCAAGAGAAATGAGCTCAAGGGAGAGGATGGTTTTGTGAATGCTGTTAAGGTGATTGAAAAGACAGTGAGTGATATGAAAAGTGAGCCATTTAAAGATGCAGAACATTGGAGGGCTTTGTTTATGAAGACGTTTGTGTTTGGAACTACGTTGCTAGTTACGGGGTCACCCAACTTCGATGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTTGACATGGTACATTCCTTCAAGTGTATGTCTCTAGCTGAAAGTAGAGATGAGGAAGAAGGACTTGAGGTTGGTTTGGTGTGTAAAAGTGCAGAGTTTGAATATTTATTTTATGTCATTCAACAAGTACTACAAACTACAAAATCCTAA 1467 0.4151 MNKFTNIIILNYCHQQMAEVRAHKLVEKSEVAPASLPSSTTRTTSSLPLSFLDLPLAGPIYVKRQFFYQFSHSTHHFCETTLPTLKHSLSLILQRFFPLAGNLLCPPPPHKPFIRTTSDDTVTLTIVESKADFNHLSSNHPKSLKQLDLLFPELTFTTMHDDTFIFPLVALQATVFQNRGLCIAITYCHIMDGKCCNHFMKSWSSLCQRGGVDLTLLENPPPCFDREVLKDPRGLEAFFLRDYFEERSTWKDKLIDQTRKHVCDDNEEYCKATIVFGKDDIEGLRTRVLAQWKKNDEFNNSPQYLSKFVVVCALVWASLVKTRCKYRDDEDDREEYFRFAADCRGRLGYPIPETYFGNCLTLCCAMFKRNELKGEDGFVNAVKVIEKTVSDMKSEPFKDAEHWRALFMKTFVFGTTLLVTGSPNFDVYETDFGFGRPTKVDMVHSFKCMSLAESRDEEEGLEVGLVCKSAEFEYLFYVIQQVLQTTKS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00691 488 PANTHER - 24 475 - -
Lapu5g00691 488 Gene3D - 23 255 IPR023213 -
Lapu5g00691 488 Gene3D - 266 484 IPR023213 -
Lapu5g00691 488 Pfam Transferase family 37 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00691 Lapu-Chr5 6706345 6717009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00691 66 437 Monolignol Biosynthesis Gene Families AT5G48930 22.997 1.89e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00691 - - var:108332870 788.104