Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00689 ATGGCAATTCTTAGGGAGCACAAACTTGTTAAAAAGTTTAAGATTGGTCCAACAATGAGAAAAAATACTTGTGTTCCACTCTCATTCCTTGATTTGCCTTTAGCTGGTCCTATTTACGTGAGACGCCAATTCTTCTACCACTTCCCCCATTCCACACTCCATTTCTGTGAAACTGCACTTCCTTCTCTCAAAATCTCTCTCTCTCAAACCCTTCAACACTTCTTCCCTCTCGCAGGAAACCTCCTTTGTCCTCCACCACCCCACAAACCCTTCATTCGTTGCACCCATGATGACTCTGTCCCCTTAACTATCATTGAGTCCAAAGCTGATTTCAACCACCTCTCATCCAACCACCCCAAAAGTCTCAAGGACTTGGATCACTTGGTTCCCAAGTTAACATGCACAAACATACACGATGGCACGTTTGTTTTCCCTTTGGTGGCATTGCAAGCCACAATTTTCCCCAACCAAGGCCTTTGCATCGCGATCACGTATTGCCACGTGATGGATGATAGTTGTTGCAGTCATTTCATGAAGTGTTGGTCTTCCATTTGCCGAAGTGGTGGCGTTGATCTCAATCTTTTAGAGAAGTCAACGCCATGCTTTGACAGGGGAGTGTTGAAGGACCCCAAAGGGTTAGAAGCTATCTTCTTAAGAGATTATTTTGAAGAGTGGTCAACTTGGAAGGAAAAACTCGTTGGGAAAACCTCTGTGGTTTGCAATGGGAATACTGAAGATTACGTCAAAGCAACATTTGTTTTTGGAAGGGATGATATCGAGGGGCTGAGAAGATTGGTGTTGAGAAGTGAAGAATTCAACACGTCACAACATGTATCGAAGTTTGTGGTGGCGTGTGCCTTTGTGTGGGCTTGTTTGGTTAAAACAAGATGCAGAAGTGATTATGAAAAACAAGACAAAGAGGAGTACTTTCGTTTCGCTGCAGATTGCAGAGATCGCCTTGAGCCTCCTGTGCCAGAGACATACTTTGGAAACTGCTTAACGTTATGCTTTGCAATGCTCAAGAGAAAGGACCTCAAGGGAGAAGGTGGTTTTGTCAATGCGGTGAAGGTTATCCAAAGGGCAGTGACTGATATGAAAAATGACTTGTTTAAGGATGCGGAAAACTGGAGGGAATCATTTATGAAGATGTTTGCGTTGGGAAGTACTTTGATCGTCACTGGGTCACCCAAGTTCTCTGTTTATGAGACTGATTTTGGATTTGGAAAGCCTACCAAAGTGGAAATGGTACATTCCTCGAAGGGTATGTCTTTAGCAGAAAGTAAAGATAATGAAGGAGGACTTGAAGTTGGCTTGGTGTGTACAATCACAGAATTTGAATATTTAGTTTCTGTCATCAAGCAAGAACATCAAGCAAGAACTTCAAGC 1386 0.4307 MAILREHKLVKKFKIGPTMRKNTCVPLSFLDLPLAGPIYVRRQFFYHFPHSTLHFCETALPSLKISLSQTLQHFFPLAGNLLCPPPPHKPFIRCTHDDSVPLTIIESKADFNHLSSNHPKSLKDLDHLVPKLTCTNIHDGTFVFPLVALQATIFPNQGLCIAITYCHVMDDSCCSHFMKCWSSICRSGGVDLNLLEKSTPCFDRGVLKDPKGLEAIFLRDYFEEWSTWKEKLVGKTSVVCNGNTEDYVKATFVFGRDDIEGLRRLVLRSEEFNTSQHVSKFVVACAFVWACLVKTRCRSDYEKQDKEEYFRFAADCRDRLEPPVPETYFGNCLTLCFAMLKRKDLKGEGGFVNAVKVIQRAVTDMKNDLFKDAENWRESFMKMFALGSTLIVTGSPKFSVYETDFGFGKPTKVEMVHSSKGMSLAESKDNEGGLEVGLVCTITEFEYLVSVIKQEHQARTSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00689 462 Gene3D - 244 456 IPR023213 -
Lapu5g00689 462 Pfam Transferase family 24 439 - -
Lapu5g00689 462 Gene3D - 7 233 IPR023213 -
Lapu5g00689 462 PANTHER - 12 454 - -
Lapu5g00689 462 SUPERFAMILY CoA-dependent acyltransferases 277 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00689 Lapu-Chr5 6696416 6697811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00689 19 440 Monolignol Biosynthesis Gene Families AT5G48930 23.077 2.17e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00689 - - pvu:PHAVU_005G109000g 846.269