Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00684 ATGGATTTCAACCTAGAGAACCCTCTTGGAAACTTCCACGACCTTCCCTGCGAAGCTCTCCCTTCCCTCTTCCTCATCGAAGCTGACCACATCCCTCCACCCAATTACTGTCAAACTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGAAGAAATGTCGTCTCTTTGATTTCACAGTTGTCCTGCACCTTCGATCCAGTTCTTTCTTACCTAGCTATCAACTACTTGGATCGCTTCCTCGCTAACCAAGGAATATTGGTAACTAGCCAAACCAAACAACTTGTTCATAATTTACTCCACTTTCAGCCAAAGCCATGGGCAAACAAGCTTCTTGCAATATCTTGCTTTTCTTTAGCGGCCAAGATGTTGAAAGCAGAGTACTCTGCCACTGATGTCCAGGTTCTTCTGAATCATGGTGATGGGGGTGTCATTTTCGAGACACAAACAGTTCAACGAATGGAGGGCATTGTCTTGGGGGCTCTCCAGTGGCGAATGCGTTCGATCACCCCCTTTTCTTTCATTCCCTTCTTCGTGAATTTGTTCAGGCTCAAAGACCCGGCATTTAGACAGGTTCTGAAGGATCGAGCATCTGAAATCATACTCAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCTATAGTTGCTGCATCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCATGCTTCTTAAGAGCAATATCCGACTGTTCATATGTTAACAAAGACATAGCCAGGGAGGAGTACGAATCTGTGTTGAATATAAATTCAACTTCAGACACACCGGTTAATGTATTAGACGAACATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGTGTGATACAAGAGCAGGAGTTCAAAAGAAGGAAAATCACCGATTATGGCAACAAACGCACGGTCCCGTTTTCTCATTTTCATCAATGCTGA 951 0.4364 MDFNLENPLGNFHDLPCEALPSLFLIEADHIPPPNYCQTLKASDFDISVRRNVVSLISQLSCTFDPVLSYLAINYLDRFLANQGILVTSQTKQLVHNLLHFQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGDGGVIFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKDIAREEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGVIQEQEFKRRKITDYGNKRTVPFSHFHQC* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00684 316 FunFam D6-type cyclin 164 257 - -
Lapu5g00684 316 Pfam Cyclin, N-terminal domain 27 165 IPR006671 -
Lapu5g00684 316 SUPERFAMILY Cyclin-like 149 226 IPR036915 -
Lapu5g00684 316 SUPERFAMILY Cyclin-like 13 165 IPR036915 -
Lapu5g00684 316 Gene3D - 33 166 - -
Lapu5g00684 316 PANTHER CYCLINS 34 230 IPR039361 -
Lapu5g00684 316 Gene3D - 22 254 - -
Lapu5g00684 316 CDD CYCLIN_AtCycD-like_rpt2 168 257 - -
Lapu5g00684 316 FunFam D6-type cyclin 33 163 - -
Lapu5g00684 316 Pfam Cyclin, C-terminal domain 168 262 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00684 Lapu-Chr5 6620208 6622783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00684 1 300 Core Cell Cycle Gene Families AT4G03270 42.633 3.42e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00684 K18812 - gmx:100799951 552.747