Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00676 ATGAGGTTGAATTATATATTCAATTTCTCGTTTGTGTCGAACGAGAACGAGAGCTATTTCACCTACTCCCTGTATAACACTTCCATTTTATCTCGATTAGTCATAGATATCTCGGGGCAGATCAAGCAACTCACGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATACGCGTTTTGTGGTGCGTTTGGGAGTTGCACTGAGATCTCAATGATGGGGCCTTGTAATTGCTTGAAGGGTTTTGAACCAAAGTCACAATCTGATTGGAATCTGTTCGATTACTCAGGAGGGTGCCAGAGGAAAACAAAATTGCAATGCGAGATTTCCAATGCCTCCAGCAGGGATAAGGACGAATTCCTAGCAATTCCCAACGTGGTATTACCTAAAGATGCACAATCTGTGGAATTAGGGAATGCTGGGGAATGTGAATCAATCTGCTTGAGCATCTGCTCCTGCACAGCTTATGCATATGACAGTAACGGCTGTTCAATATGGGTTGGGAACCTTCTGAATGTGCAACAGTTGTCTTCAGATGATAGTAGTGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCATGATGATAAAAGCAGTAAGGGGACGATTATTGGTGTGGTTGTGGGAGTGGTTGTTGGCGTTGGGGTTCTCTTGGCCATTCTTTGGCGAAGGAGGAGAATGGCGGTATCACGAAAGGCTGCGGAGGGTTCGTTGGTAGCATTTGGGTACAGAGATTTGCAAGATGCAACGAGGAATTTCTCTGAGAAATTAGGAGGAGGAGGGTTTGGTTCTGTTTTCAAAGGAACGTTGGATGATTCCAGTGTGATAGCAGTGAAGAAGTTGGAAAGCTTTAGCCAAGGAGAGAAACAGTTCAGAACAGAAGTTCGGACAATAGGGACAATACAACATGTTAATCTTGTCAGGCTCCGTGGATTCTGCTCTGAAGGCACCAAAAAGCTGCTAGTTTATGAGTACATGCCAAATGGCTCCTTGGATTTCCACTTGTTCCAGAACAAGAACTTCATGGTATTGGACTGGAAAAGGAGATACCAAATTGCTTTGGGAATAGCAAGGGGATTGGCTTACCTTCATGAGAAATGCAGAGACTGCATTATACACTGTGACATAAAACCAGAAAACATTCTCCTAGATGCTGATTTTTGTCCCAAGATTACAGACTTTGGCCTGGCTAAACTTGTTGGAAGGGATTTCAGCAGGGTCCTGGCAACACTTAGAGGAACAAAAAACTATCTTTCTCCAGAATGGATTTCTGGGGTGCCTATCACAGCCAAAGCCGACGTGTACAGCTATGGAATGATGCTTTTTGAGATTGTGTCAGGTAGGAGGAACTCTGATGAGCTATCTCATTCTGAAGATGATCAATTTATGTTCTTTCCTAACAGGGCAACAAACATAGTTGCCCAAGGTGGCAATGTTCTTAGCCTTTTAGATCCTTGTTTGGAACAAAATGCTGACACTGAGGAGGTCACTCGAATGGCAACAGTTGCTTCGTGGTGTATCCAAGACAATGAAACTCACCGGCCAACCATGGGTCAGGTAGTTCATATCCTTGATGGGATCTTGGACGTGAATTTACCTCCAATTCCAAGATTTCAAGTCTCTGTTGACAACTAG 1668 0.4388 MRLNYIFNFSFVSNENESYFTYSLYNTSILSRLVIDISGQIKQLTWLENAQQWNLFWSQPRQQCEVYAFCGAFGSCTEISMMGPCNCLKGFEPKSQSDWNLFDYSGGCQRKTKLQCEISNASSRDKDEFLAIPNVVLPKDAQSVELGNAGECESICLSICSCTAYAYDSNGCSIWVGNLLNVQQLSSDDSSGETLYLKLAASEFHDDKSSKGTIIGVVVGVVVGVGVLLAILWRRRRMAVSRKAAEGSLVAFGYRDLQDATRNFSEKLGGGGFGSVFKGTLDDSSVIAVKKLESFSQGEKQFRTEVRTIGTIQHVNLVRLRGFCSEGTKKLLVYEYMPNGSLDFHLFQNKNFMVLDWKRRYQIALGIARGLAYLHEKCRDCIIHCDIKPENILLDADFCPKITDFGLAKLVGRDFSRVLATLRGTKNYLSPEWISGVPITAKADVYSYGMMLFEIVSGRRNSDELSHSEDDQFMFFPNRATNIVAQGGNVLSLLDPCLEQNADTEEVTRMATVASWCIQDNETHRPTMGQVVHILDGILDVNLPPIPRFQVSVDN* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00676 555 CDD PAN_AP_plant 112 200 - -
Lapu5g00676 555 PANTHER OS07G0415500 PROTEIN 7 549 - -
Lapu5g00676 555 Pfam Protein kinase domain 265 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00676 555 Pfam PAN-like domain 124 182 IPR003609 -
Lapu5g00676 555 Gene3D Transferase(Phosphotransferase) domain 1 337 543 - -
Lapu5g00676 555 CDD STKc_IRAK 268 538 - -
Lapu5g00676 555 SUPERFAMILY Protein kinase-like (PK-like) 250 548 IPR011009 -
Lapu5g00676 555 FunFam Serine/threonine-protein kinase 229 336 - -
Lapu5g00676 555 Pfam S-locus glycoprotein domain 4 95 IPR000858 GO:0048544
Lapu5g00676 555 ProSiteProfiles Protein kinase domain profile. 262 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00676 555 ProSiteProfiles PAN/Apple domain profile. 116 200 IPR003609 -
Lapu5g00676 555 Gene3D Phosphorylase Kinase; domain 1 230 336 - -
Lapu5g00676 555 SMART serkin_6 262 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00676 555 SMART ntp_6 124 199 IPR003609 -
Lapu5g00676 555 FunFam Serine/threonine-protein kinase 337 543 - -
Lapu5g00676 555 ProSitePatterns Protein kinases ATP-binding region signature. 268 291 IPR017441 GO:0005524
Lapu5g00676 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00676 Lapu-Chr5 6465454 6467121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00676 214 545 Receptor kinase-like Gene Family AT5G20050 40.496 1.07e-79 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu5g00676 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00676 - - gmx:100810583 858.211