Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00675 ATGAAGAACCCATGGTTCTGCATCTCTCTTCTCACCTTATTCTTCTCTTTGTTCTCCCACAATTCCCTTGCAGCTCTCACCACCGTTTCCGCAAACCAAACTCTCACTGGGGACCAAACCCTCGTCTCTGAAGGTGAAATCTTCGAACTGGGTTTCTTCAAGCCGGGTAATTCTTCTAACTACTACATAGGCATATGGTACAAAAAGGTTACCAAGCAAACAATAGTTTGGGTAGCAAATAGAGACAACCCAGTCTCTGATAAGAACACTGCCACGTTAACAATATCAGGTGGCAATCTAGTTCTCTTGGATGGATCTTCTAAACAAGTTTGGTCAACAAACATGAGTTCTTCCAGGTCAGGTTCTATCGTAATAGCTATTCTCCTCGATTCCGGGAATCTTGTGTTAAGAGATAGGAATAATGGTGCTTCTGCTTCAGAACCTTTGTGGCAGAGTTTTGATCACCCAACTGACACGTGGCTTCCGGGTGGCAAAATCAAACTCGACAACAAAACAAAGAAACCTCAATACCTCACTTCATGGAAGAACAACGAAGATCCTGCGGCGGGCCTTTTTTCCCTTGAACTAGACCCCAAAGGAACCACTTCTTATTTGATTCTTTGGAACAAGTCCGAACAGTACTGGACAAGTGGTCCTTGGAATGGCCAGATTTTTAGTTTAGTTCCTGAGATGAGGGCGAACTTTCTCTACAATTTCACGTTTGTGTCGAACGACAACGAGAGCTATTTCACATACTCCATGTATAACTCTTCCATTATATCTCGGTTTGTGATGGATGTCTCGGGGCAGGTCAAGCAACTCTCGTGGTTAGAGAATGCTCAACAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATACGCGTTTTGTGGCGCGTTTGGGAGCTGCACTGAGAACTCCATGCCGTATTGTAATTGCTTGAGGGGTTTTGAGCCAAAGTCACTGTCTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTGAAAGGAGAACCAAGTTGCAATGTGAGAATTTGAATCCCTCTAACGGGGATAAGGACAGTTTTCTTGAGATTCCCAATATGGCGTTACCTAAACATGCACAATCTGTGGGATCAAGGAATGCATGGGAATGTAAATCAACTTGCTTGAACAACTGTTCCTGCACGGCTTATGCATATGACAGTAACGGGTGTTTGATTTGGATAGGCAACCTTTTGAATCTGCAGCAGCTATCTTTAGATGATAGTAGCGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCGTGATGATAAAAGCAGTAAGGGGACGATTATTGGTGTGGTTGTGGGATTTCTTGTTGGCATTGGGGTTCTCTTGGCCATTCTTTTGTTTTTCTTGATTAGGCGAAGGAAGAGAATGGTTGGAGCAGGAAAGCCTGTGGAGGGTACGTTGGTGGCATTTGGGTACAGAGATTTGCAAAATGCAACGAGGAATTTCTCGGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGTTTTTAAAGGAACGTTGGGTGATTCAAGTGTGGTAGCAGTGAAAAAGTTGGAGAGTATTAGCCAAGGAGAAAAACAGTTCCGTACAGAAGTTAGCACAATAGGGACAGTGCAACATGTTAATCTTGTTAGGCTCCGTGGATTCTGCTCTGAAGGTGCGAAAAAGCTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATTTGTTCCACAGCAAGAGCAGTAAGGTGTTGTTGGATTGGAAAATGAGATACCGAATTGCGTTAGGAACAGCAAGGGGATTAAATTACCTTCACGAGAAGTGTAGAGATTGTATCATACACTGTGATGTGAAGCCAGAAAACATTCTCTTAGATGCTGATTTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGACTTCAGCAGGGTTCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATCACAGCCAAAGCTGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCCGGTAGGAGGAACTCTGAGCCATCAGAAGATGGCCAATTTACCTTCTTTCCAACCTTTGCGGCAAATGTTGTTGTTCAAGGTGGCAATATTGTTAGCCTTGTGGACCGTGGTTTGGAGGGGATTGCTGAAATTGAGGAGGTGGCTCGAATAATAAAAGTTGCTTCATGGTGTATCCAAGACAACGAGGCTCACCGGCCAAGCATGGGTCAGGTGGTTCAAATCCTTGAGGGGATCTTAGAGGTGAATATGCCTCCAATTCCAAGATCCCTTCAAGTGTTTGTTGACAACGCGGAGAATTTAGTCTTCTACACTGACTCAAATTCCACACAAAGTTCACAGGAGAAGAGCAATGCTTTAACGACCTCATCCTCTCAAGCCAGATGTAACATCTCTTCACCAAGCTCCAAGTCCTCGGGAGGAGAAAATTAG 2505 0.4435 MKNPWFCISLLTLFFSLFSHNSLAALTTVSANQTLTGDQTLVSEGEIFELGFFKPGNSSNYYIGIWYKKVTKQTIVWVANRDNPVSDKNTATLTISGGNLVLLDGSSKQVWSTNMSSSRSGSIVIAILLDSGNLVLRDRNNGASASEPLWQSFDHPTDTWLPGGKIKLDNKTKKPQYLTSWKNNEDPAAGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFVSNDNESYFTYSMYNSSIISRFVMDVSGQVKQLSWLENAQQWNLFWSQPRQQCEVYAFCGAFGSCTENSMPYCNCLRGFEPKSLSDWNLEDHSGGCERRTKLQCENLNPSNGDKDSFLEIPNMALPKHAQSVGSRNAWECKSTCLNNCSCTAYAYDSNGCLIWIGNLLNLQQLSLDDSSGETLYLKLAASEFRDDKSSKGTIIGVVVGFLVGIGVLLAILLFFLIRRRKRMVGAGKPVEGTLVAFGYRDLQNATRNFSEKLGGGGFGSVFKGTLGDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNGSLDFHLFHSKSSKVLLDWKMRYRIALGTARGLNYLHEKCRDCIIHCDVKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGQFTFFPTFAANVVVQGGNIVSLVDRGLEGIAEIEEVARIIKVASWCIQDNEAHRPSMGQVVQILEGILEVNMPPIPRSLQVFVDNAENLVFYTDSNSTQSSQEKSNALTTSSSQARCNISSPSSKSSGGEN* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00675 834 CDD STKc_IRAK 502 770 - -
Lapu5g00675 834 ProSiteProfiles Protein kinase domain profile. 496 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00675 834 CDD B_lectin 32 156 IPR001480 -
Lapu5g00675 834 Pfam D-mannose binding lectin 74 182 IPR001480 -
Lapu5g00675 834 FunFam Serine/threonine-protein kinase 21 153 - -
Lapu5g00675 834 SMART ntp_6 353 428 IPR003609 -
Lapu5g00675 834 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Lapu5g00675 834 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Lapu5g00675 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 221 IPR036426 -
Lapu5g00675 834 FunFam Serine/threonine-protein kinase 571 775 - -
Lapu5g00675 834 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Lapu5g00675 834 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00675 834 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Lapu5g00675 834 Pfam Protein kinase domain 499 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00675 834 SUPERFAMILY Protein kinase-like (PK-like) 482 794 IPR011009 -
Lapu5g00675 834 Gene3D Transferase(Phosphotransferase) domain 1 571 777 - -
Lapu5g00675 834 Gene3D - 23 154 IPR036426 -
Lapu5g00675 834 CDD PAN_AP_plant 341 429 - -
Lapu5g00675 834 PIRSF SRK 2 819 IPR024171 GO:0004674
Lapu5g00675 834 MobiDBLite consensus disorder prediction 797 834 - -
Lapu5g00675 834 SMART blect_4 32 156 IPR001480 -
Lapu5g00675 834 Gene3D Phosphorylase Kinase; domain 1 465 570 - -
Lapu5g00675 834 FunFam Receptor-like protein kinase 4 464 570 - -
Lapu5g00675 834 Pfam PAN-like domain 353 410 IPR003609 -
Lapu5g00675 834 PANTHER OS07G0415500 PROTEIN 8 779 - -
Lapu5g00675 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00675 Lapu-Chr5 6459112 6461898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00675 452 777 Receptor kinase-like Gene Family AT5G20050 42.222 4.82e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu5g00675 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00675 - - gmx:100810583 1296.95