Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00672 GGTTTGATTGGATTAGGAAGTTTAGAAGAAAAAGACATTGAAGGTATTGAAGTGCCATGTTATACTTTTGCAAGCATTGTATCAGCTACAGATGATTTTTCAGATTCAAACAAGCTTGGAAGAGGAGGTTATGGACCTGTATATAAGGGAACCTTTTATGGAGGTCATGATATTGCTGTAAAGAGACTTTCAAATGTTTCCACTCAAGGATTACAAGAATTCAAAAATGAGGTTATTCTGATTGCCAAACTTCAACACCGGAACCTTGTTAGACTAAGGGGCTATTGCATAAAAGGAGATGAAAAAATC 309 0.3592 GLIGLGSLEEKDIEGIEVPCYTFASIVSATDDFSDSNKLGRGGYGPVYKGTFYGGHDIAVKRLSNVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKI 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00672 103 Pfam Protein tyrosine and serine/threonine kinase 36 100 IPR001245 GO:0004672|GO:0006468
Lapu5g00672 103 Gene3D Phosphorylase Kinase; domain 1 7 103 - -
Lapu5g00672 103 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 103 - -
Lapu5g00672 103 SUPERFAMILY Protein kinase-like (PK-like) 16 100 IPR011009 -
Lapu5g00672 103 ProSiteProfiles Protein kinase domain profile. 33 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00672 103 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 3 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00672 Lapu-Chr5 6404631 6405033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00672 6 103 Receptor kinase-like Gene Family AT4G21410 56.122 8.50e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g00672 PK_Tyr_Ser-Thr 2.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00672 - - vun:114184726 205.297