Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00671 ATGCCAAACAAGAGCTTGGACTCATTTATATTTGACCGAACACGAACTTTACTTCTGGATTGGCCAAAGAGATTCAAGATAATTGTAGGCATTGCGCGAGGCATGCTATATCTTCACCAGGACTCCAGATTGAGAGTGATTCACAGAGATTTAAAAACTAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCCGACTTTGGACTAGCCAAAATATTTGGGGGGAAAGAAACTGAAGCAAGTACAGAGAGAGTGGTGGGAACCTATGGGTATATGGCTCCAGAGTATGCATTGGATGGAGTTTTTTCAATCAAATCTGATGTTTTCAGCTTTGGAGTAGTCCTTCTAGAAATCCTCAGTGGAAAAAGGAACACAGGATTTTATGAATCCAAACAAATTTCTAGTCTTTTGGGTTATGCATGGAAGTTGTGGACAGAGAATAGGCTGCTGGATTTAATGGATTCATGCCTTGGTGAAACATGCAACCAAGATCAATTCATTAAGTGTGCAATTATTGGACTATTATGCATACAAGATGAACCAATTGATCGACCTACTATGTCGAATGTTTTGTTCATGCTTGACAGAGAAACAACAAACATGCCATTGCCAATTCCCACACAACCAACCTTTTTTGTGAACAAGCGTTTTTCTAGCTCAGCTTCCTCTTCTAGCAAACCAGAGATAAGTCAGCAATTTGAGAGCAGTTATCAAGAAGGTCGT 729 0.3964 MPNKSLDSFIFDRTRTLLLDWPKRFKIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGVFSIKSDVFSFGVVLLEILSGKRNTGFYESKQISSLLGYAWKLWTENRLLDLMDSCLGETCNQDQFIKCAIIGLLCIQDEPIDRPTMSNVLFMLDRETTNMPLPIPTQPTFFVNKRFSSSASSSSKPEISQQFESSYQEGR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00671 243 Gene3D Transferase(Phosphotransferase) domain 1 1 204 - -
Lapu5g00671 243 MobiDBLite consensus disorder prediction 220 243 - -
Lapu5g00671 243 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 204 - -
Lapu5g00671 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Lapu5g00671 243 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 230 - -
Lapu5g00671 243 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00671 243 SUPERFAMILY Protein kinase-like (PK-like) 1 226 IPR011009 -
Lapu5g00671 243 Pfam Protein tyrosine and serine/threonine kinase 3 192 IPR001245 GO:0004672|GO:0006468
Lapu5g00671 243 SMART serkin_6 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00671 Lapu-Chr5 6403586 6404615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00671 1 238 Receptor kinase-like Gene Family AT4G23140 52.049 2.70e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g00671 PK_Tyr_Ser-Thr 1.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00671 - - vun:114184726 458.373