Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00670 ATGAGAAGTGAAGAGGTTGTGGTGTCCTTCTTCCTTCTCTCTCTAACGATATGCTTCCAGATATGTTTTGCTGGAGATACTTTGAACGCTAACCAGAACATCACTTACCACTCCGAAGGAAACCTTGTTTCATCAAACAAAACATTTGAGCTTGGTTTCTTTTCTCCTGGTGAGAGTGGTGAGAAAGGATACTTGGGGATATGGTATCACGGGTTGACAACGCAAACAGTGGTGTGGGTTGCCAATAGAGATCATCCTGTTGCGGAATCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATGTTGTGTTAGAAGATTCATCGGAAAGGCGCTGGTCCTCTAAACTTGGGCCATCCTCGTCCACAAACAGAACATTGAAGCTCCTAGATTCTGGGAATCTAGTACTAACAGAACATCACTCTGAAACGACTTACCTGTGGGAAAGCTTCCAAAACCCAACAGACACGTTTCTTCCCGGCATGAAAATGGATGCGACTTTAGCGTTGACTTGCTGGAGAGACCCCGCTGACCCGGCACCTGGGAACTTCACCTTCAAGCTGACTAAAGAGGCTGAGAAAGGAAGCTTCGTTGTGCAACATCAATCACAAATCTACTGGGCACTTGATGAAACTGACACAGAACCAGCTTCCCAGGTGGTACTTAATTTGTTGTACAACGAGACCTCGGCTACTAAATCGTACAATTATTCAAACCAAACAATCTTCGTTTTGCAACCTTACATGTACAAGAAATCTAGGGTGTTAATGAATTATAGCGGGGAGATACAGTTTCTGAAGTTGGATGAGAACTACTCAGAATGGAATAAGCAATGGTGGCGGCCAGAGGACAAGTGTGACATACATGATTATTGCGGGAACTTCGGCATATGTAACAGAGATAACTTTATTCCCTGCAAATGTTTGCCAGGATTCCGTTCTACTCAGGATTTTCGTTCTGATGGAGAATCGGAGCCCCACGGGTGTGAGAGAAAATCAACATCGTGTACCACCAAGGACGTGACGTTCCTGAACTTAACCAACATAAAACTGGGCGAACCAGACCAACAAATTTTCACTGAAACAGAAGCAGAATGCCAATCCATCTGCATCAACAAATGTCCCGATTCACAGTGCCAGGCATATTCATATAAAAGTTCTGTAGATGGTGACCGTGATTCATACTCGTGCAATATCTGGACGCGGCCTTTACCTTCTCTGCTTGAGAACTACGGTCGCGGTCGTTATCTTTCTATCTTGGTTAAGACAACAGACATAGCACCAACAGCAAAATCCTGTGAACCTTGCGGCACATATGTAATTCCTTATCCATTGAGCACTGGGCCAAACTGTGGAGACCCCACGTACAACAAGTTCAATTGCACCAAATCCTCTGGCAAACTTAGTTTCATGATGCCCGGAGGAATACTATACCCAGTAACTTGGATCGATGAAGAGACCAGAAAGTTTTTCATTCAAACTGACAATTCCGATTCCTTTAATTCCAGTTTCAGCAATCAAAATAGCATCCATTTTCCGTTTAATGTAATTGACAACATTGAAGGTGCTGGAATAAAAATGATTTGGCTACCAGCGCCAGAACCGCCGTGTAGTGAGGTTAAAGATTGCATGAATTGGCCACATTCGACATGCAGAGCAACAGGGCAAGGAGGAAGTCGGTGCCATTGTAATTCAAACTATTATTGGAATGACAAAATCGTGGGATGCATCCCAGAAGAAGAGCCATCAAGAAACCATTCAACTCGACTGGAATTGATTCTTTTAGTAACTCTTGGTTGCGTGGCTACTGTGGCATGCATAATAGCATTTGGCATTGTGTGGAAAATGAAAAAAGCCCGTAAGCTTGATCGCGCAAGCACCCAAATTAAGGATAGTTTGTATGAGAGTGATAGACATGTGAGAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAAAGGCATCGAAGGCATTGAGGTTCCCTGTTACACTTTTGTAAGCATTCTCGAAGCTACAGATAATTTCTCAGATTCAAACAAGCTTGGAAGAGGAGGTTATGGACCTGTATATAAGGGAACGTTTCCTGGAGGTCTAGAAATAGCTGTAAAGAGACTTTCGAGTGTTTCCACTCAAGGCCTACTAGAATTCACAAATGAGGTTATTTTGATTGCCAAACTTCAACACCGGAACCTGGTTAGACTGAGGGGCTACTGCATAAAAGGGGATGAAAAAATCTTACTTTATGAATATATGCCAAATAAGAGTTTGGACTCATTTATATTTGACCGGAGTCGGACTATACTCTTGGATTGGCCAATGCGGTTCGAGATAATTGTAGGCATTGCACGAGGCATGCTCTACCTTCACCAAGACTCTAGATTGAGAGTGATTCATAGAGATCTGAAAACCAGCAACGTTCTTCTAGACGAGGAAATGAATCCAAAGATATCAGACTTTGGCCTTGCCAAAATATTTGGAGGAAAAGAAACTGAAGCTAGTACAGAGAGAGTAATGGGAACCTATGGATACATGGCTCCAGAGTATGCTTTGGATGGACTTTTTTCAGTCAAATCTGATGTTTTCAGCTTTGGGGTAGTCCTGCTAGAGATTCTGAGTGGAAAAAGGAACACAGGATTCTATGAGTCCAAACAAATTTCTAGCCTTTTGGGTTATGCATGGAAGCTATGGTCAGAGAACAAGCTACTGGATTTAATGGATCAGTGTCTTGGTGAAACATGCAACAAAAATCAATTCATTAAGTGTGCAGTAATTGGACTATTATGCATACAAGATGAACCAACTGATCGACCAACTATGTCAAATATTTTATACATGCTTGACATAGAGGCAACAACTATGCCAATTCCAGCACAACCAACATTTTTTATGAACAAGCGTTATTCTAGCTCAGCTTCTTCTTCTAGCAAACCAGAAACAAGTTTACAATTTGACAGCAGTTATCAACAAGGTCGATAG 2970 0.4226 MRSEEVVVSFFLLSLTICFQICFAGDTLNANQNITYHSEGNLVSSNKTFELGFFSPGESGEKGYLGIWYHGLTTQTVVWVANRDHPVAESSGVFRIAEDGNVVLEDSSERRWSSKLGPSSSTNRTLKLLDSGNLVLTEHHSETTYLWESFQNPTDTFLPGMKMDATLALTCWRDPADPAPGNFTFKLTKEAEKGSFVVQHQSQIYWALDETDTEPASQVVLNLLYNETSATKSYNYSNQTIFVLQPYMYKKSRVLMNYSGEIQFLKLDENYSEWNKQWWRPEDKCDIHDYCGNFGICNRDNFIPCKCLPGFRSTQDFRSDGESEPHGCERKSTSCTTKDVTFLNLTNIKLGEPDQQIFTETEAECQSICINKCPDSQCQAYSYKSSVDGDRDSYSCNIWTRPLPSLLENYGRGRYLSILVKTTDIAPTAKSCEPCGTYVIPYPLSTGPNCGDPTYNKFNCTKSSGKLSFMMPGGILYPVTWIDEETRKFFIQTDNSDSFNSSFSNQNSIHFPFNVIDNIEGAGIKMIWLPAPEPPCSEVKDCMNWPHSTCRATGQGGSRCHCNSNYYWNDKIVGCIPEEEPSRNHSTRLELILLVTLGCVATVACIIAFGIVWKMKKARKLDRASTQIKDSLYESDRHVRGLIGLGSLEEKGIEGIEVPCYTFVSILEATDNFSDSNKLGRGGYGPVYKGTFPGGLEIAVKRLSSVSTQGLLEFTNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRSRTILLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNVLLDEEMNPKISDFGLAKIFGGKETEASTERVMGTYGYMAPEYALDGLFSVKSDVFSFGVVLLEILSGKRNTGFYESKQISSLLGYAWKLWSENKLLDLMDQCLGETCNKNQFIKCAVIGLLCIQDEPTDRPTMSNILYMLDIEATTMPIPAQPTFFMNKRYSSSASSSSKPETSLQFDSSYQQGR* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00670 989 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 115 968 - -
Lapu5g00670 989 SMART serkin_6 673 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00670 989 CDD B_lectin 42 153 IPR001480 -
Lapu5g00670 989 Gene3D Phosphorylase Kinase; domain 1 649 748 - -
Lapu5g00670 989 ProSiteProfiles Protein kinase domain profile. 673 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00670 989 FunFam Receptor-like serine/threonine-protein kinase SD1-8 20 150 - -
Lapu5g00670 989 Pfam D-mannose binding lectin 76 165 IPR001480 -
Lapu5g00670 989 SUPERFAMILY Protein kinase-like (PK-like) 659 978 IPR011009 -
Lapu5g00670 989 Pfam PAN-like domain 335 403 IPR003609 -
Lapu5g00670 989 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 642 748 - -
Lapu5g00670 989 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 173 IPR036426 -
Lapu5g00670 989 MobiDBLite consensus disorder prediction 966 989 - -
Lapu5g00670 989 Gene3D - 20 151 IPR036426 -
Lapu5g00670 989 CDD STKc_IRAK 679 945 - -
Lapu5g00670 989 SMART blect_4 33 153 IPR001480 -
Lapu5g00670 989 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Lapu5g00670 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Lapu5g00670 989 ProSiteProfiles PAN/Apple domain profile. 335 423 IPR003609 -
Lapu5g00670 989 Gene3D Transferase(Phosphotransferase) domain 1 749 952 - -
Lapu5g00670 989 SMART ntp_6 337 422 IPR003609 -
Lapu5g00670 989 Pfam Protein tyrosine and serine/threonine kinase 676 942 IPR001245 GO:0004672|GO:0006468
Lapu5g00670 989 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 749 952 - -
Lapu5g00670 989 Pfam S-locus glycoprotein domain 247 313 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00670 Lapu-Chr5 6396793 6400588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00670 663 984 Receptor kinase-like Gene Family AT4G23140 53.659 6.80e-121 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g00670 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00670 - - vun:114185132 1587.39