Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00661 ATGAATTGGAATTTGCATGCATTCCAGAGGGACTCTCCCCTTGCTGTTGACATGTCAACTGCCATTCTTCAACTCTCAGAGAATGGTGACCTGCAAAAAATCCATGACAAATGGCTCTTAAAACAGGATTGTTCTACACAAGAAAATGAAGTTGATTTAAACAAACTATCTCTGGGGAGCTTCTGGGGCCTCTTTCTTATATGTGGCATTGCATGTCTCCTTGCTTTGATTGCATTCTTCACCAGAGTGTTATGTCAATACACAAAATTCAGCCCAGAACCTGAGAAACATGATGAGGAAATTTCACCTGACAGGCCTAAAGGTAAAGGGCCTTTCCGAACCACTACTAGCTTCAGAGACTTGATTTATTTTGTGGATAAGAAAGAAAAAGAAATCAAAGAGATACTTAAGCAGAAGAGTAAGAAAAGGAGACGCAGTCTGAGCTTAGATGGCCAATCTAGTTCATCTGCCTAA 474 0.4051 MNWNLHAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKQDCSTQENEVDLNKLSLGSFWGLFLICGIACLLALIAFFTRVLCQYTKFSPEPEKHDEEISPDRPKGKGPFRTTTSFRDLIYFVDKKEKEIKEILKQKSKKRRRSLSLDGQSSSSA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00661 157 Coils Coil 125 145 - -
Lapu5g00661 157 Gene3D - 4 46 - -
Lapu5g00661 157 FunFam Glutamate receptor 5 38 - -
Lapu5g00661 157 MobiDBLite consensus disorder prediction 92 114 - -
Lapu5g00661 157 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 123 IPR015683 -
Lapu5g00661 157 MobiDBLite consensus disorder prediction 92 107 - -
Lapu5g00661 157 SUPERFAMILY Periplasmic binding protein-like II 7 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00661 Lapu-Chr5 6268673 6269754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00661 7 156 Ion Channels AT1G42540 43.709 1.68e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00661 K05387 - gmx:100799912 200.675