Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00660 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAAAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGCTGCTCAACTTTGCTGGCAATGAGAGGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGGGTTGGACAGAGTGAGCAAGAGGAACAGCAACGATGTTGAGAATGGTGGCGAAGTGGAGAAGCAGCAAGAGAAGGTGCAGAAGGAGGAAGTGGAGGAGGGTGAATTGGGAACTTTGAAGTGGCCTAGGACCGACCTGGAGAATGGGGAGTTCGTGCCAGAGATGCCGCCACCACCCCCACCGAGGAGGAGCGACATTGAGAACGGGGAGATTGTGAGTGAGAAGTGGAAAGGAAGAGAGCTGGAGAAGGGGGAGATTGCATCTGGGAAATGGAGGAAAGAGGATGTTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGTGAAGCTGAGAGAGGTGAATATGGGTCGTGGAGAGGAGTAAACGATGAAATTGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGGAGATTATGATAACAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGTGGAAAATTGAACGTGAACGTGAACGAGAAAGTACACCTTCTTCTGGGAGATATACAGGGGATGATTTTTATAGGAAGAAGGAATTGAATATTCGTGGCAGTCAGCATGCTAAAAGTTCTCCAAGGTGGGAGGGTGGACAACAGCGGAATGTAAGGATCAGTTCAAAGATTGTGGATGACGAGAAGAATGTTCACAGCAATGGTAAGGACCATGCACGAGATTACATTTCTGGAAGTCGCTTGAAGAGGCTTGGCAATGATACTGACAGCTATGACCGGAAGCATTCTGCAGATTATGCTGGTTTAAAAAGCCGAAGACTTTCTGATGATAGCTGTCGCCAAGTTTATTCAGAAAACTATTCTCGTCGCTCTGTGGAACGGTCTTACCGAACTAATAGTACTACAAAATTATCTGCAGATAAATATTCATGTAGGAATCATGAATCTTCTTTGTCTATTAGACAGGCTTATGACAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGAGACCGAGGCAGGTATTATGATCATAGAGATCGAACTCCAGTACGCCGGTCTCCTTGTGGTCGTGACAGATCCCCCTATAACCGGGAGAAGTCTCCCCATGGTCGGGAGAGGTCTCCATATCCGTATAACCGGGAGAAGTCCCCCCATGCTCGGGAGAGGTCCCCATATCCACATAACCGGGAGAAGTCCCCCCATGGTCGGGAGAGGTCCCCATATACGTATAACCGGGAGAAATCGCCCCATGGTCGGGAGAGGTCACCATATACACGGAACTGGGACAGAAGTCGTCAGCATGATCATAAATTGAGAAGTCCAACACGTGCTGAGCAGTCACCACCAGACCGTAGTCGGCGATATGATCCTAGGGAGAGTTCCCCAAATTTGTTAGAAGCATCTCCCCTTGATCAGGCTAGGAAAGACAGTCGACGTGATTCAAGTTGTAAAACCTTACCAAGTGAAAAACATGATTCCCAAAATTGTAAGGATCACGAGGATAAGCAGATTCAAAGGGATTCAAATTGTTCAAGTACCGAATCTCAAAATGAAAAAAGTGTGCAAGATGCCATTAAGTCTGTTGAGAAAGACATCTGCATTCAACCTTTAAAGGAACAACAGAGTTGCAGCCCAACTGTTACCCACAAAGAATCTCCTCACTCAGAGCCACCTCCTGAGGAGATGCCTTCTATGGAGGAAGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTATTACCTGGACTACGGTGGTGTAGAAAATGGTCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGATGAAGGTGTACTAATGTCGGATCACTTTATCAAGCACCTAGATAGTGACAGGTGGTTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCAGAGTTTTCCTTCAATTGTGTCTGATAGCATAACTCAACTGGTAAATCCTCCAGAAGCTCCTGGTAATAGCTTATCAGATACACCTGACATTCTTCAATCTGCTCATGAGAATCACCAGGAAATGCTAACCCCCTCGCCCCCGCTGCTAGTATGCCCTAATGACAGTTTGCGTTCATCTGAACTTTTAGAGGACTTCCACATTGATGAAAGAGTTAAAAATCTGTTAGAGGGTTACGATGTCACTCCTGAGATGGAAGTTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAAAGGGGAGGGATTGCGAGACTATGAAGGTTTTCCTTGGAGTGTTTCCTGCCTTGGGGAAGATTATGACTCTAGTACTGATTTAACATCAAGAGATTCTGAGTCTCAGTTAAGTATGTCATCTGATAAGGATAATGGACTTGCATTTGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGACGATGCCCTGGATAGATATTCTAGAAAGAAACTTGTCCTAAATAATGGTTTTTCGTTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAAGAGGCTTGATCTTCCACTGTGGGCGTTCAGTGCTGATGAGCGGGATGAAAGCAGTGTTGCAGGCAGATCAGTCCAAAGTAAGCCTGTTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCAGTGGTCAGAATAAATGCATGTGTAGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGCCACAAGACAAGGGGCAAGGAAAGACATCATTCTAGGTCAACTCGGCCATTCTCTTCATCCAGTGATAGCAAGAGATCATCGACTGAACACGATTCTCAGTTAAAAGCTTTTAGTGAACAAGGTTCTTACCGGATGATGGAATTCCTGAACACTCCTAAAGACCATCTCTGCACTATCCATGAGTTGCAATTACATTTGGGTGACTGGTATTATTTTGATGGTTCTGGGCGTGAAAGAGGGCCCTCATCATTTTCAGAGCTACAGTATTTAGTAGATCAAGGTATCATAAAAGGGCATAGCAGTGTGTTCAGGAAAAGTGATAAACTCTGGGTTCCTATTACCTCTGCAGCAGAAACATCTGATGGCAGTCTCACGATCCAACAAGAAAGCAGTTCAATATCTGGTGCATGCTCTGGTTTTCCATCAAAGCGAACTCAAGCATGCGGCGAACTTTGCACAAATTCAAATTTGTTTAACAGCTTACATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAGCTGGTGATGAAATCATATAAAAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATTGAAAAACAACTATATTGGAAATCAGAAGGTGATGCACATGCTGCCAAGAGAGCCCGGATGCTGGTAGATGATAGTGAAGATGACAGTGATTTGGAAGATGGTGATGTTGCTATTGAGAAGGATGAATCCAGTTTTGAGGATCTATGTGGTGATGCCACTTTACCTGAAGATGAAATTGGTGTTACTGATTCTGAAATGGGAAGCTGGGACAATTTGGATGGCCGTGTGCTAGCACGGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTCGCTTCAATGACTTGCAAGCGTTGGAGAGCTGCTGTAAGGTTTTATAAAGGAGTGTCAATGCAGGTCAACTTGTCATCCTTGGGTTATTCCTGCACTGATACCATGTTGTGGAACATTTTGAATGCTTACGAGAAAGAAAAGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACAGCTGACATGCTTGAGAAAGTTCTTCTTTCGTTCCCTGGTTTATTTACAGTAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCAAATGTGAAATGGATCAAGAGCCGAAGTTCACACTTGACTAAAATTTCTGAGGATCATCATAAAATTAGAAGCCTTAAACATATTACAGAGCTAACCTCATCTGTTTCCAAATCCAGCAGTATAGGTATAGATGATTTTGGGCAATTGAAGGATTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTATTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCTTCCTCCATTCTATCTAGGGATGCTCGTACAAGACGTTGGGCAATCAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTTCTTGCTTCAAGACTCAGGGAAATTATGAAGACAAACTCTTGCGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAATGGTTATTACAGTAGCCGGGGGTTGAATTCTGTAAAGGATGACATAAGTAGAATGTGCCGTGATGCCATAAAAGTGAAGAGTCGGGGTGATGCTAGTTACATGAATCATATTATCACACTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTCTGCCTGACAGAAATGCACTACTGAAATCATGGGACAATGACTTGCCTGCAGTGTCCTGCTCTACTTTCTCAAAGTATAAGAAGAATAGGTTGGTGAATGAAAGGAAGTATAGGAGTAATGGGACACATGGTTTGGATAATGTGGAGTATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGTTGAACAAGAAATCTATGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATAAGTCTTATGAAGATGGAAAGAGTGACAGTGATACTACAACCTCTGACACTGAAAGTGAACGAGAAGTACATTCAGAAAGTCTAATTAGGGAGTCAAGAGGGGAAGGATACTTGACATCTGAGGAAGAGTTGGATTTTATAACTGATGATCGAGAGTGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCCGTTACCAGGAAATATAAAGTCATTGATCAATATTGCATTGTAGCTGATGAAGAGGATGTGAGAAGGAAGATGAGGGTTTCATTACCAGATGACTATGCTGAGAAGATGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTCATCGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCGGAGGAGTTAGATTGGACTCTTCCAGAGAAACATTTGTTTATAGAAGATACACTCCTTCGAACATTGAATAAGCAAGGTAGGAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCATTGCGGCCTGTTGTTGAAGATATTAAAAGACATGCTGATGAGGATTGTGATGCAAGAATGGTTAAAATGTGTCAAGGTATTCTAAAGGCCATGGACAGTCGTCCAGATGACAAATACGTAGCTTATAGGAAGGGGCTCGGTGTTGTTTGCAACAAGGAAGAGGGATTTGCTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACCTAGTTGTCGTTGATGCTATGCATATGGCCAATTATGCGAGTCGAATATGTCATTCGTGCCGACCTAACTGTGAAGCCAAGGTTACTGCTGTTGATGGTCAATATCAAATTGGTATTTATAGTGTTCGCAAAATTCAACATGGTGAGGAGATCACTTTCGACTACAATTCTGTAACAGAGAGCAAGGAGGAGTATGAAGCATCAGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTGAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTCGATCGGCATTATTTAATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAAGACTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAAAGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTACGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAACTGTTTCCTTCCTCTGGAAAGGTGAGGGTTCATTTGTTGAGGATCTTCTTAAGTGCATCTCTCCTCATATTGAAGAAGACATCTTGAATGATCTCAAGTTCAAAATTCATGCTCACGATCCTTCAAATTCAGTAGATATTCAAAGGGAGCTTCGGAAATCTTTGTTATGGTTGAGGGACGAGGTTCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATCAAGCGATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTATCGAAAGATATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCATAACCAGAGTAACGCAGATCCAGATCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTACCAGACACCAGTTCCTTTTATGCCAAGGCTCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACAGTCAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTTTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7278 0.4308 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLLNFAGNERRKMKARKSELGLDRVSKRNSNDVENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPPPPRRSDIENGEIVSEKWKGRELEKGEIASGKWRKEDVERGEIVPEKGGRKGEAERGEYGSWRGVNDEIEKGEFIPDRWYKGDYDNSRIRRYHSGRDKGWKIERERERESTPSSGRYTGDDFYRKKELNIRGSQHAKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYISGSRLKRLGNDTDSYDRKHSADYAGLKSRRLSDDSCRQVYSENYSRRSVERSYRTNSTTKLSADKYSCRNHESSLSIRQAYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPHGRERSPYPYNREKSPHARERSPYPHNREKSPHGRERSPYTYNREKSPHGRERSPYTRNWDRSRQHDHKLRSPTRAEQSPPDRSRRYDPRESSPNLLEASPLDQARKDSRRDSSCKTLPSEKHDSQNCKDHEDKQIQRDSNCSSTESQNEKSVQDAIKSVEKDICIQPLKEQQSCSPTVTHKESPHSEPPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAASPLAPQSFPSIVSDSITQLVNPPEAPGNSLSDTPDILQSAHENHQEMLTPSPPLLVCPNDSLRSSELLEDFHIDERVKNLLEGYDVTPEMEVEAIKEVLLMNFENAKGEGLRDYEGFPWSVSCLGEDYDSSTDLTSRDSESQLSMSSDKDNGLAFGISSDWFSTRWSCKGGDWKRNDDALDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDDLYFPSQSKRLDLPLWAFSADERDESSVAGRSVQSKPVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSTRPFSSSSDSKRSSTEHDSQLKAFSEQGSYRMMEFLNTPKDHLCTIHELQLHLGDWYYFDGSGRERGPSSFSELQYLVDQGIIKGHSSVFRKSDKLWVPITSAAETSDGSLTIQQESSSISGACSGFPSKRTQACGELCTNSNLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSEGDAHAAKRARMLVDDSEDDSDLEDGDVAIEKDESSFEDLCGDATLPEDEIGVTDSEMGSWDNLDGRVLARIFHFLKSDLKSLVFASMTCKRWRAAVRFYKGVSMQVNLSSLGYSCTDTMLWNILNAYEKEKINSIILRGCVNITADMLEKVLLSFPGLFTVDIRGCNQFGELTLKFANVKWIKSRSSHLTKISEDHHKIRSLKHITELTSSVSKSSSIGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKNGYYSSRGLNSVKDDISRMCRDAIKVKSRGDASYMNHIITLFIQLATRLEESSKSLPDRNALLKSWDNDLPAVSCSTFSKYKKNRLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMDSESETSDDDLDKSYEDGKSDSDTTTSDTESEREVHSESLIRESRGEGYLTSEEELDFITDDREWGARMTKASLVPPVTRKYKVIDQYCIVADEEDVRRKMRVSLPDDYAEKMSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWTLPEKHLFIEDTLLRTLNKQGRNFTGTGSTPMSYPLRPVVEDIKRHADEDCDARMVKMCQGILKAMDSRPDDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEDLLKCISPHIEEDILNDLKFKIHAHDPSNSVDIQRELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYQAITSPPVYISPLDLGPKYTNKSGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSFPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR* 2426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00660 2425 CDD SET_SETD2-like 1869 2017 - -
Lapu5g00660 2425 SUPERFAMILY SET domain 1870 2018 IPR046341 -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 1635 1670 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 147 172 - -
Lapu5g00660 2425 Pfam Protein SET DOMAIN GROUP 2 C-terminal 2006 2425 IPR045606 -
Lapu5g00660 2425 CDD F-box_SF 1252 1282 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 587 601 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 268 311 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 587 616 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 558 572 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 248 267 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 1616 1670 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 367 573 - -
Lapu5g00660 2425 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 445 2425 - -
Lapu5g00660 2425 Pfam SET domain 1938 1995 IPR001214 GO:0005515
Lapu5g00660 2425 SMART set_7 1861 2001 IPR001214 GO:0005515
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 46 97 - -
Lapu5g00660 2425 Gene3D SET domain 1838 2026 IPR046341 -
Lapu5g00660 2425 ProSiteProfiles SET domain profile. 1852 1995 IPR001214 GO:0005515
Lapu5g00660 2425 Gene3D Ribonuclease Inhibitor 1239 1426 IPR032675 -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 210 247 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 210 311 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 964 1005 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 367 510 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 46 125 - -
Lapu5g00660 2425 MobiDBLite consensus disorder prediction 521 557 - -
Lapu5g00660 2425 SUPERFAMILY F-box domain 1239 1282 IPR036047 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu5g00660 SET 1.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00660 K22748 - gmx:100776205 4181.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00660 5 6242325 6258522 Lapu5g00660 5 6242325 6258522 ECH