Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00659 ATGATAATGTATTCCGGCGACGGCTCCTCCTTGGACCCCATGTTTTCCGGCACCAGTCTACAGTCACTCCTCTCTCTCAACCCTTCCCTCTTCGTGGATGGCTTCCCCACCTTGGCTTCGCTAACCGACGACCCTACCCTACTCCAGCAACCCTCAGAACCCCCAAAACTCCTTGTCCCCAAAACTGAACCCTCTCAACCCTTCAAATTCTTCCCCCAATACCATCCCACCGCTGCCTTCCACCGCCTCCCACACCTCCGCTCCCCGGACCAATCCCATCCGAAACGCCAGCGGCTGGACTCTCCGGTGATCCCGCAGAGCAACCTGGCTCGGCAACGCAGACAGAAGTTGAGCGAGAAAACGCGGTGCCTGCAGAAGCTGATGCCGTGGGACAAGAAAATGGACCAAGGCACTCTTCTTGAAGAGGCCTATAAGTACGTGAGGTTCCTGCAGGCACAGTTCCGCGTGCTCCAGTCCATGCCCTCCCACTCTTCCCCTTCTTCACCTTCTTTCCATCAAAACGAGGCCGTATTTGTGGATCTGGAGAAGCTGAATCGCTCTCAGCTATTGCAGGTTCTGGTTAACTCCCCAGTCGCCCAAACCATGCTTTATTCTCAAGGTTTTTGTGTCTTTTCCCTTGAACAGTTATCTCTTCTCAGAAAATTATCCGATAGGCGGCACCACCACCATCACCAAGATCCTGATTCCTCCAAATCCTTTTTCAACTAA 729 0.535 MIMYSGDGSSLDPMFSGTSLQSLLSLNPSLFVDGFPTLASLTDDPTLLQQPSEPPKLLVPKTEPSQPFKFFPQYHPTAAFHRLPHLRSPDQSHPKRQRLDSPVIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQGTLLEEAYKYVRFLQAQFRVLQSMPSHSSPSSPSFHQNEAVFVDLEKLNRSQLLQVLVNSPVAQTMLYSQGFCVFSLEQLSLLRKLSDRRHHHHHQDPDSSKSFFN* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00659 242 SMART finulus 107 156 IPR011598 GO:0046983
Lapu5g00659 242 MobiDBLite consensus disorder prediction 84 116 - -
Lapu5g00659 242 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 90 221 IPR045843 GO:0003700|GO:0006355
Lapu5g00659 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 150 IPR011598 GO:0046983
Lapu5g00659 242 Gene3D - 105 165 IPR036638 GO:0046983
Lapu5g00659 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 161 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00659 Lapu-Chr5 6237609 6238387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00659 113 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 46.429 9.13e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu5g00659 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00659 - - aprc:113855910 276.174