Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00652 ATGAGCCCCTTATTTCGATTCTGTTTTAACCACGAAAATTACACTGATTCTAGCCCTTATGCTACCAACTTAAACCAGTTGTTTGACCTGTTACACTCCAAAGTACCCCTTAATGGTTTTGCACTTGATTCCGTTGGCCAAGGCATGGACCAAGTGAACGGTCTAGCTTTATGTCGTGGTGATGTCAACGCCACAAACTGCCTGTCTTGTGTCAATGATGCAACCAAAAAGCTTCAAGAACGGTGCCCAAAGAAGAAGGGAGCAATAGTTTGGTACGATTACTGCTTTCTTAAGTACTCTAATGAACACTTCTTCGGTGAAACTGATGAGAAGAACAAGTTTTATATGGTTAACATCTACGACGTAGATGACCCTGCTACTTTCAATGATAAAGTTTATGAGTTGCTAAGTGGTTTGTCTTACAATGCTTCTCAAACTCCCATGTTATATGCCGTAGGGGAATTGCAACTTGAAAAAACAAAAACACTGTATGGTTTGGCTCAGTGCACAAGGGACCTCTTTGGCCCCAGTTGTAAGAAGTGTCTTGATGATGCTATCAATGAACTTCCAGATTGTTGTGATGGAAAGGAAGGTGGAAGGGTTGTGGGTGGGAGCTGCTATGTTAGATATGAACTATACCCTATTGTTGAGGCCTAG 657 0.4186 MSPLFRFCFNHENYTDSSPYATNLNQLFDLLHSKVPLNGFALDSVGQGMDQVNGLALCRGDVNATNCLSCVNDATKKLQERCPKKKGAIVWYDYCFLKYSNEHFFGETDEKNKFYMVNIYDVDDPATFNDKVYELLSGLSYNASQTPMLYAVGELQLEKTKTLYGLAQCTRDLFGPSCKKCLDDAINELPDCCDGKEGGRVVGGSCYVRYELYPIVEA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00652 218 ProSiteProfiles Gnk2-homologous domain profile. 110 215 IPR002902 -
Lapu5g00652 218 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 2 216 - -
Lapu5g00652 218 FunFam Cysteine-rich receptor-like protein kinase 28 5 103 - -
Lapu5g00652 218 Gene3D - 3 104 IPR038408 -
Lapu5g00652 218 Gene3D - 111 214 IPR038408 -
Lapu5g00652 218 FunFam Cysteine-rich receptor-like protein kinase 10 112 215 - -
Lapu5g00652 218 Pfam Salt stress response/antifungal 124 213 IPR002902 -
Lapu5g00652 218 Pfam Salt stress response/antifungal 8 101 IPR002902 -
Lapu5g00652 218 ProSiteProfiles Gnk2-homologous domain profile. 2 104 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00652 Lapu-Chr5 6175360 6176311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00652 14 217 Pollen Coat Proteome AT4G20670 38.679 2.24e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00652 - - pvu:PHAVU_005G112700g 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00652 5 6175360 6176311 Lapu5g00652 5 6175360 6176311 ECH