Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00632 ATGAAGAAATTCATGGTTTTGCACCTTGTGACATGGATTTGGATATGTGGTGTTGCTCTCAGCACAAGGCCTGCTAGTGTGAACATTGGTGCGATTTTTGCTTTCGATTCGGTCATAGGTAGAGTTGCGAAGGAAGCTATGGAAATGGCCGTTTCTGATGTCAATGGGCACCCCACAGTTCTCAATGGAACCAAACTCAACTTGATAATGAAGGATGCCATGTGCAATGCTTTTCTGGGATCAATTGGAGCTTTTCAGGTACTTGAGAAAGGGGTTGCAGCCATAATTGGTCCCCAGTCATCTGCTGTAGCTCACACGGTTTCTCAAATTGCTGATGCTCTCCAAGTTCCTCTTGTTTCATATGCTGCCACTGATCCAACCCTGTCCTCCCTCCAGTTTCCTTTCTTTATTCGAACTGTGCAAAGTGACTTGGCACAAATGACTGCAATGGCTGATCTAATTGACTTCAATGGATGGAAAGAGGTCATTGTTGTATTCTTAGATGATGATTTTGGAAGAAATGGAATATCTGCTTTGAGTGATGAACTTGAAAAACGGAGATTGAAAATTTCTTATAAACTGCCTTTGAGTATTAAGTTTGATCTTGATGAAATCACCAACTTACTCAATCAATCCAAATTGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAACCCTGATCCGAGATTGAGAATTTTTTCTGTTGCCCATAAACTTCAAATGATGGCCAAGGATTATGTCTGGCTTGTCACAGATTGGCTCTCAGCTACACTAGGTTCATTATCCCCAGTGAATCAGACCTCTTTCAGTGTTCTCCAAGGAGTTGTTGGTCTTCGTCAACACATTCCGGAGTCCAGAAAAAAGAGAGATTTCATTTCTCGGTGGATAAAAAGGCCAAAAGCTGGACTGACAAATACTAGTTTGAACTCCTATGGATTTTCTGCTTATGACACGGTTTGGGCAGTTGCACTTTCAATTGATAAATTCATCGAAGTACATAATTTTTCCTTTGTGCTTCATGATAACTATAAGCTATCTCATACAGAGGGAATTGGCATTCAGCTTGACAAACTCAAAATGTTCACTGGTGGATCTGATCTGGTCAAGATATTATTAGAGTCAAATTTTACTGGTGTGAGTGGTCAAGTTCTGTTTAATTCTGACAGAAATATTGTAAGTGGTGGTTATGATATTATCAATGTCAATCAGTTGGGAATTAATAGGGTTGGTTTTTGGTCTAATTATTCAGGATTTTCAGTTGTACCCCCCGAGACTCTTAAAAAAAGGGAACACAAGTTTTCCAAAGATCAGAAGCTTGACAACATTACTTGGCCAGGTGGAAAGACAGATCGACCACGGGGCTGGGTGATTGCTGATAATACCAAGCCACTGAGAATTGGAGTGCCAAAAAGAGCAAGTTTTGTTGAATTTGTAACTGAAGTACCAGATAGTCATGAAATTCAGGGGTATTGCATCGATGTGTTCAAGAAAGCCCTAGAATTTATCCCATATGAAGTTCCCTTTGTATTCAAACCTTTCGGGAATGGTAAAGCAAATCCCAATTATGATGAGCTTGTGAAAATGGTTGCTGATAATGTATATGATGCTGTTGTTGGAGACATTGCAATTGTGACAAACCAGGAAGATACCATAAGCTCCCTTTCTAAAATGGTGATGATAGTCTGGCTTTTTCTATTGATGGTGATCACGGCTAGCTATACTGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCGCCCATCACAGGAATTGATAGCTTGATTGCAAGTAACTGGCCTATTGGATACCAAGTAGGGTCATTTGCTTACAGCTATCTGGCAGATAATCTTTATGTATCAAAATCAAGGCTTGTTCAACTAGGCTCCCCTGAGGAATATGCTTTAGCACTGCAGAAGGGACCATCTGGGGGAGGGGTGGCAGCTATCGTCGATGAGCTTCCCTATGTTGAGTTATTTCTGTCAAAAGAAACTGATTTTGGTATCATTGGACAGCCATTCGCCAGAAGCAGTTGGGGATTTGCCTTTCAAAGAGAATCTCCTTTTGCCTTTGACATGTCTACAGCAATTTTGAAACTTTCTGAGCATGGGGATCTTCATAGGATACATGATAACTGGTTCTGTAAAATGGGCTGTCCTGAAGAAAGGACAAGCAACTCCAAGCCTGACCAGCTTCACTTGGTCAGCTTTTGGGGCCTGTATCTCTCATGTGGTGTGGTCTCTCTTGCTGCTCTTGTTGTGTTTCTGCTGCGAATGATTCGGCAATACGCCCGCTTCAAACAAAAGCAAAAGAATCTTGCTTCTTCGTCCTCTGAACAACCATCAAGCATTCACTGTTCCCAGGTTGTTGTTAACTTCTTCAACTTCATTGATGAGAAGGAAGAGGCCATCAAGAAGATACCAAAAGATTCTGGTCTTTTGCTACTTCCAGCTATGGTGATTCTTGCCTTATCACGTGCAGCTGATGAAATGATGGAGGTGATGTGGGTCGCAAGTTATAGAAGATTTTTTGTAGGGAGGGTGTTGTTTCTCTTGGTTTTGTTCTTGTGGATACCAACACAGGTAGTGGTGGGAAGGACAGGAACTGCTATCACAAACTCTACTGCTTCTTCGACACCAAGAGTTTTGAGAGTTGGAGCACTGTTCACTCTTAATTCAATAATTGGAAGATCGGCTAAACCTGCACTCGCGGCAGCTTTAGAAGATGTTAATGCTGATTCAAGCGTTCTCCCTGGCATTAAACTGGAAATTGCTTTGCATGATACAAATTGCAGTGGGTTTGCTGGAACAATGGAAGCTTTGCAGTTGATGGAGGATGAAGTGATTGCTGCTATTGGTCCACAGTCCTCAGGAATAGCCCATGTCATTTCTCATGTGGTCAATGAACTCCATGTCCCTCTTATTTCATTTGGGACAACAGACCCTTCTCTGTCTTCCCTTCAGTACCCATATTTTGTTCGCAGCACCCAAAGTGACTATTATCAGATGTATGCAATTGCAGATTTGGTAGATTACTACAGATGGAGGGAGATAATAGCCATTTATGTAGATGATGATAATGGAAGAAATGGAATTTCAGTACTTGGAGATGCTCTGGCAAAAAAACGTGCCAAGATCTCTTACAAGGCTGCATTCCCTCCTGGGGCCCCCAAGAAAGACATCAGTGACTTGTTAAATGGAGTTAACTTAATGGAATCACGTGTCTTTGTTTTGCATGTTAATCCTGAAACTGGTTTGAGCATTTTTTCTATTGCTGAGAAGCTAGGAATGATGGACAGTGGCTATGTATGGATTGCAACAGATTCGCTTGCTTCAGCACTTGATTCATCAGAGCCTGTTGATCCTAAAACGATGAATCTCCTACAAGGGGTTTTGGCTTTTCGTCATCACACTCCTGATACTAACGAAAAGAAGAATTTTCTCTCCAGGATGAAGAGACTGAGAATCAAGGAGACTCCAAGCTTCAATTCCTATGCATTGTATGCATATGATACCGTTTGGTTAGTAGCCCGTGCTCTTGATACTTTTTTAAAAGAAGGTGGTGTGGCATCTTTCTCCTCTGACCCTAACTTGAGAGACTCAAATGGAAGCACGCTGCATTTAGAATCACTTCGTGTTTTTGATGAAGGCCCTACTTTTCTCCAGACAATTTTGAGAACCAACTACACTGGTCTGACAGGACTAGTTCAGTTTGATAATGAAAGGAATAGAATTCGTCCGGCATATGATATCTTGAACATTGGTGGATCTGGAATGCGCAGAATTGGTTATTGGTCTAATTACTCAGGTCTCTCAGTTGTGGCTCCAGAAATTCTGTATAAGAAGCCACCTAACACTTCAACAAGCAGCCAGCAACTGTACGGTGTTATATGGCCTGGAGAAACTACAGCTAAACCAAGAGGATGGGTGTTTCCCAACAATGGAAAGCCACTGAGAATTGCAGTGCCTAACCGAGTAAGCTACTTGGAGTTTGTTTCTAAAGACAAGAACCCCCCTGGAGTAAGAGGTTATTGCATTGATGTATTTGAAGCTGCCATAAACTTGTTGCCTTATCCTGTCCCGCGCGAATACATATTATTTGGACCTGGTGATAGAAATCCTAGCTACGATGACATTGCAAGTCAAGTTGCACTAAACAACTATGATGCAGCTGTTGGTGATGTTACAATTGTCCCCAACAGGACGAGGTTTTTGGATTTTACTCAACCTTACATAGAATCAGGTCTGGTTGTTGTTGTTCCTGTCAAGGAGATCAAATCTAGTCCTTGGTCTTTCCTCAAGCCCTTCACTGCTCAAATGTGGTGCGTTACTGGTGCCTTTTTTATCCTTGTGGGAACCGTTGTATGGATTCTTGAGCACCGGCACAATCCGGAGTTCCGTGGTAGACCAAAGAAACAACTCATGACAGTCTTTTGGTTTAGTTTCTCAACAATGTTCTTCTCACACAGAGAGAACACAGTGAGTGGTCTTGGGAGATTGGTTCTAATCATATGGCTTTTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTAACATCCATCCTCACAGTTCAGCAACTGTCATCACAAATTGAAGGAATTGACAGCTTGATCTCAAGTAATCAACCAATTGGAATTCAAGAAGGGTCATTTGCACGGAAGTATTTGACAGAAGAACTCAATGTACAACCATCAAGGATAGTTACATTGAAAAATATGGAAGCATATATTGATGCCCTTCAGCGTGGACCAAAAGATGGAGGGGTTGGGGCTGTTGTTGATGAGCTTCCTTATGTTGAAATCTTAATGTCAAATACAAACTGTAAGTTCAGAACCGTTGGGCAGGAGTTCACTAAAAGTGGTTGGGGATTTGCATTCCAGAGGGACTCTCCCCTTGCTGTTGACATGTCAACTGCCATTCTTCAACTCTCAGAGAATGGTGACCTGCAAAAAATCCATGACAAATGGCTCTTAAAACAGGATTGTTCTACACAAGAAAATGAAGTTGATTTAAACAAACTATCTCTGGGGAGCTTCTGGGGCCTCTTTCTTATATGTGGCATTGCATGTCTCCTTGCTTTGATTGCATTCTTCACCAGAGTGTTATGTCAATACACAAAATTCAGCCCAGAACCTGAGAAACATGATGAGGAAATTTCACCTGACAGGCCTAAAGGTAAAGGGCCTTTCCGAACCACTACTAGCTTCAGAGACTTGATTTATTTTGTGGATAAGAAAGAAAAAGAAATCAAAGAGATACTTAAGCAGAAGAGTAAGAAAAGGAGACGCAGTCTGAGCTTAGATGGCCAATCTAGTTCATCTGCCTAA 5337 0.4165 MKKFMVLHLVTWIWICGVALSTRPASVNIGAIFAFDSVIGRVAKEAMEMAVSDVNGHPTVLNGTKLNLIMKDAMCNAFLGSIGAFQVLEKGVAAIIGPQSSAVAHTVSQIADALQVPLVSYAATDPTLSSLQFPFFIRTVQSDLAQMTAMADLIDFNGWKEVIVVFLDDDFGRNGISALSDELEKRRLKISYKLPLSIKFDLDEITNLLNQSKLFGPRVYVVHVNPDPRLRIFSVAHKLQMMAKDYVWLVTDWLSATLGSLSPVNQTSFSVLQGVVGLRQHIPESRKKRDFISRWIKRPKAGLTNTSLNSYGFSAYDTVWAVALSIDKFIEVHNFSFVLHDNYKLSHTEGIGIQLDKLKMFTGGSDLVKILLESNFTGVSGQVLFNSDRNIVSGGYDIINVNQLGINRVGFWSNYSGFSVVPPETLKKREHKFSKDQKLDNITWPGGKTDRPRGWVIADNTKPLRIGVPKRASFVEFVTEVPDSHEIQGYCIDVFKKALEFIPYEVPFVFKPFGNGKANPNYDELVKMVADNVYDAVVGDIAIVTNQEDTISSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLADNLYVSKSRLVQLGSPEEYALALQKGPSGGGVAAIVDELPYVELFLSKETDFGIIGQPFARSSWGFAFQRESPFAFDMSTAILKLSEHGDLHRIHDNWFCKMGCPEERTSNSKPDQLHLVSFWGLYLSCGVVSLAALVVFLLRMIRQYARFKQKQKNLASSSSEQPSSIHCSQVVVNFFNFIDEKEEAIKKIPKDSGLLLLPAMVILALSRAADEMMEVMWVASYRRFFVGRVLFLLVLFLWIPTQVVVGRTGTAITNSTASSTPRVLRVGALFTLNSIIGRSAKPALAAALEDVNADSSVLPGIKLEIALHDTNCSGFAGTMEALQLMEDEVIAAIGPQSSGIAHVISHVVNELHVPLISFGTTDPSLSSLQYPYFVRSTQSDYYQMYAIADLVDYYRWREIIAIYVDDDNGRNGISVLGDALAKKRAKISYKAAFPPGAPKKDISDLLNGVNLMESRVFVLHVNPETGLSIFSIAEKLGMMDSGYVWIATDSLASALDSSEPVDPKTMNLLQGVLAFRHHTPDTNEKKNFLSRMKRLRIKETPSFNSYALYAYDTVWLVARALDTFLKEGGVASFSSDPNLRDSNGSTLHLESLRVFDEGPTFLQTILRTNYTGLTGLVQFDNERNRIRPAYDILNIGGSGMRRIGYWSNYSGLSVVAPEILYKKPPNTSTSSQQLYGVIWPGETTAKPRGWVFPNNGKPLRIAVPNRVSYLEFVSKDKNPPGVRGYCIDVFEAAINLLPYPVPREYILFGPGDRNPSYDDIASQVALNNYDAAVGDVTIVPNRTRFLDFTQPYIESGLVVVVPVKEIKSSPWSFLKPFTAQMWCVTGAFFILVGTVVWILEHRHNPEFRGRPKKQLMTVFWFSFSTMFFSHRENTVSGLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSNQPIGIQEGSFARKYLTEELNVQPSRIVTLKNMEAYIDALQRGPKDGGVGAVVDELPYVEILMSNTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKQDCSTQENEVDLNKLSLGSFWGLFLICGIACLLALIAFFTRVLCQYTKFSPEPEKHDEEISPDRPKGKGPFRTTTSFRDLIYFVDKKEKEIKEILKQKSKKRRRSLSLDGQSSSSA* 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00632 1778 Coils Coil 1746 1766 - -
Lapu5g00632 1778 CDD GluR_Plant 462 715 - -
Lapu5g00632 1778 MobiDBLite consensus disorder prediction 1714 1735 - -
Lapu5g00632 1778 Gene3D - 1551 1664 - -
Lapu5g00632 1778 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 886 1723 IPR015683 -
Lapu5g00632 1778 Gene3D - 142 418 - -
Lapu5g00632 1778 SUPERFAMILY Periplasmic binding protein-like I 23 455 IPR028082 -
Lapu5g00632 1778 SMART GluR_14 1320 1662 IPR001320 GO:0015276|GO:0016020
Lapu5g00632 1778 SMART GluR_14 465 717 IPR001320 GO:0015276|GO:0016020
Lapu5g00632 1778 FunFam Glutamate receptor 1430 1560 - -
Lapu5g00632 1778 Gene3D - 663 722 - -
Lapu5g00632 1778 Gene3D - 45 393 - -
Lapu5g00632 1778 CDD PBP1_GABAb_receptor_plant 885 1276 IPR044440 -
Lapu5g00632 1778 Gene3D - 999 1272 - -
Lapu5g00632 1778 Pfam Ligand-gated ion channel 716 747 IPR001320 GO:0015276|GO:0016020
Lapu5g00632 1778 CDD PBP1_GABAb_receptor_plant 28 422 IPR044440 -
Lapu5g00632 1778 Pfam Receptor family ligand binding region 44 402 IPR001828 -
Lapu5g00632 1778 Pfam Receptor family ligand binding region 901 1256 IPR001828 -
Lapu5g00632 1778 FunFam Glutamate receptor 1556 1664 - -
Lapu5g00632 1778 Gene3D - 903 1247 - -
Lapu5g00632 1778 Gene3D - 1430 1550 - -
Lapu5g00632 1778 CDD GluR_Plant 1317 1660 - -
Lapu5g00632 1778 MobiDBLite consensus disorder prediction 1714 1728 - -
Lapu5g00632 1778 Pfam Bacterial extracellular solute-binding proteins, family 3 1376 1661 IPR001638 -
Lapu5g00632 1778 FunFam Glutamate receptor 459 555 - -
Lapu5g00632 1778 FunFam Glutamate receptor 1314 1430 - -
Lapu5g00632 1778 Gene3D - 1314 1429 - -
Lapu5g00632 1778 Gene3D - 459 578 - -
Lapu5g00632 1778 SUPERFAMILY Periplasmic binding protein-like II 461 715 - -
Lapu5g00632 1778 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Lapu5g00632 1778 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 231 254 - -
Lapu5g00632 1778 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Lapu5g00632 1778 FunFam Glutamate receptor 999 1158 - -
Lapu5g00632 1778 Pfam Bacterial extracellular solute-binding proteins, family 3 465 715 IPR001638 -
Lapu5g00632 1778 FunFam Glutamate receptor 142 298 - -
Lapu5g00632 1778 SUPERFAMILY Periplasmic binding protein-like I 878 1311 IPR028082 -
Lapu5g00632 1778 FunFam Glutamate receptor 612 719 - -
Lapu5g00632 1778 SUPERFAMILY Periplasmic binding protein-like II 1295 1661 - -
Lapu5g00632 1778 Pfam Ligand-gated ion channel 1662 1693 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00632 Lapu-Chr5 5979169 5994011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00632 545 682 Ion Channels AT1G05200 54.676 1.48e-39 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00632 K05387 - gmx:100799912 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00632 5 5979169 5994011 Lapu5g00632 5 5979169 5994011 ECH
Lapu11g00229 11 5172992 5178914 Lapu5g00632 5 5979169 5994011 PCT