Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00605 ATGGATCCCTTCATCCACAAGCTCCGACGCCACCTTCTCGCATGGCTTCACCGATCTCGCTCCGGTGCGGTGTTTTTTGTGCGGAGAATTTCGTATAAGGAGGTTCGAAGAGCAACGGATGGCTTCCACAGAGTCGTTTATAGCAATTCCGATGTTTCTGCGTATGCTGCCAGGTTTGAAGACAGTGGCGGCCTTTGTTTGGTGAGAGAAGTGAAAGGCTTCGACGAAGGAAACGATCATTTTCACAGACACGTGCAGTTCTTGGGACGCTTGCGACATCGCCACCTTCTCTCGCTCAAAGGTTTTTCCGTCGGGCGCAATCACAAGAGATTGCTCATATTTGACGACATAGAAAATGGAAGCTTGAAGGATCATCTAAATGACCCTTTGAAGACTCCCTTAGATTGGAGGACAAGATTACAAATAGCCAATGGCGTTGTGGCTGCACTGGAATATTTGTTTCTCTTCAGTGAACCACCTGTATGGCATGTTTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAACTATCTGACTTTGGCCTTCTTCCATCTGGTGCGAATTCTGTTATGATGCCATATTCAGAAGATTGTTTGAAACAGAAAAGTTGCAGGATTATATTCCAACTTGGAGTGCTCATACTAGAACTGGTTACCGGTCAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAAGAATCACGATTTTACAATTCCATTGATAAGATGATAGACCCTGATCTTGGTAACAATTATGACTGTACGGAGCTTAAAAGTCTTCTGGGTGTGGCAAAACTATGTATCAAATCATGGGACAAGCCCTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAAAAGAAGATTGATATTACCCACGAATAG 906 0.4371 MDPFIHKLRRHLLAWLHRSRSGAVFFVRRISYKEVRRATDGFHRVVYSNSDVSAYAARFEDSGGLCLVREVKGFDEGNDHFHRHVQFLGRLRHRHLLSLKGFSVGRNHKRLLIFDDIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVWHVSITSSNIMLDENFTAKLSDFGLLPSGANSVMMPYSEDCLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLGVAKLCIKSWDKPSFTIPQLFRHLQKKIDITHE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00605 301 ProSiteProfiles Protein kinase domain profile. 32 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00605 301 PANTHER OS01G0253100 PROTEIN 27 296 - -
Lapu5g00605 301 SMART tyrkin_6 24 289 IPR020635 GO:0004713|GO:0006468
Lapu5g00605 301 FunFam Protein kinase superfamily protein 16 115 - -
Lapu5g00605 301 FunFam probable receptor-like protein kinase At1g49730 211 300 - -
Lapu5g00605 301 Pfam Protein tyrosine and serine/threonine kinase 78 189 IPR001245 GO:0004672|GO:0006468
Lapu5g00605 301 SUPERFAMILY Protein kinase-like (PK-like) 24 267 IPR011009 -
Lapu5g00605 301 FunFam Protein kinase superfamily protein 117 207 - -
Lapu5g00605 301 Gene3D Transferase(Phosphotransferase) domain 1 211 300 - -
Lapu5g00605 301 Gene3D Transferase(Phosphotransferase) domain 1 117 202 - -
Lapu5g00605 301 Gene3D Phosphorylase Kinase; domain 1 15 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00605 Lapu-Chr5 5561385 5564394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00605 22 300 Receptor kinase-like Gene Family AT3G19300 35.430 3.16e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lapu5g00605 PK_Tyr_Ser-Thr 5.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00605 - - gmx:100791979 547.74