Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00603 ATGGGTGTATCAGGGAAGTGGATTAAAGCATTGATTGGTATAAAGAAATCAGAAAAGCCAGAGTCTTCTGAGAAGGACGGAAATAAGGTTGGCAAGTTTAACCATCAGAGAAGGCATGCTGTTGAATTTGATAATGGTAAACTTCCAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGAGAATGTCCATGCAAACCTTGATACCCATTATTCGTCTTCTTCTTCACAACAAGCACCTGATGCTGCACATGATCCACAGATGAGGGAGGAATGGGCTGCGATACACATTCAAACAGCGTTTCGAGGGTTTCTGGCCAGAAGAGCATTACGGGCTTTGAAAGGCGTGGTAAGGCTCCAGGCCCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCTCAGCAGAAACATCAGCAAAACCTAGCAAATGAAGCTCGGGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGGTCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGAACAAGACAGCAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACGGTGCATGAAAATGAAGCTAAGGACGGTAAAAGTGAAACCACACCTCAGTTGAGCTCTGCTAACAAGAAACCATTCTCATCAAACGCTCATCCAAACCTGGCAAATCATGGAACTGGTCTGACGATTTCTGATGAGTGTGATTCTTCACCTAGTAAGTCTGCTGGTGGTTTGCTAGAATCATCAAAAACACAGTCTATTAAGATAACTTCTAAGGGAAATGTTGAAAATACTGCTGAAGAAGTTAACTCAAAACCTAGAATTGGGTCAAGATCTCACAGTAATCCAAAGGAGAGAACATCACAGGTAGATAAGCAGGCGAAAAAACGATTATCTCTGCCTAACAGTGGGGGTGGTGCAGGATCTCAAACAGTCAAACACCCTATCAGTACTACTAACGTGAAAGGGACGCTAAGCACACAAAAGTCTAGTGGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGTGAATACAAAATCAGATCCATAG 1296 0.4437 MGVSGKWIKALIGIKKSEKPESSEKDGNKVGKFNHQRRHAVEFDNGKLPNELDCEATPPIGDENVHANLDTHYSSSSSQQAPDAAHDPQMREEWAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKHQQNLANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGTRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSETTPQLSSANKKPFSSNAHPNLANHGTGLTISDECDSSPSKSAGGLLESSKTQSIKITSKGNVENTAEEVNSKPRIGSRSHSNPKERTSQVDKQAKKRLSLPNSGGGAGSQTVKHPISTTNVKGTLSTQKSSGDKPKLNGRRDVNTKSDP* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00603 431 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 385 415 - -
Lapu5g00603 431 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Lapu5g00603 431 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Lapu5g00603 431 SMART iq_5 114 135 IPR000048 GO:0005515
Lapu5g00603 431 SMART iq_5 91 113 IPR000048 GO:0005515
Lapu5g00603 431 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Lapu5g00603 431 MobiDBLite consensus disorder prediction 281 359 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 15 49 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 15 88 - -
Lapu5g00603 431 Gene3D - 93 134 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 272 431 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 68 84 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 416 431 - -
Lapu5g00603 431 FunFam IQ-domain 11 91 142 - -
Lapu5g00603 431 MobiDBLite consensus disorder prediction 360 375 - -
Lapu5g00603 431 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00603 Lapu-Chr5 5545629 5552963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00603 1 431 IQD Protein Family AT3G22190 54.299 8.90e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00603 - - gmx:100781346 650.973