Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00592 ATGGGTTTTTTGTTGAAAGAAGCTTTGAGGACTCTCTGCGGTCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCAAAATTCTAAGTTATTAATCTGGGAAGAATGCTACTATGAACCTTTGCCATGCTCTCCACCCATGTTTGGGATGGCAGATTTGCCGTACCAGAATGGGGGATGGTTTTCTTCAGAGTCTCAGTCATCTCAACTCGGGATTCAAGAGGAAGACCGAGTCAATTCTTTGATTAACAAAATGACTGTAAACAATTCAGTTATCATTGCAGGTGAAGGTATGATTGGACGGGCTGCATTTACAGGCAACCATCAGTGGATACTTTCGAATAGTTTCACAAAAGATGTATATCCACCGGAGCTATACCCTGAAGTGCATCACCAATTTTCAGCTGGAATACAGACAGTAGCAGTTATTCCTGTACTTCCTCACGGGGTTGTTCAACTTGGTTCTTTTTCGCCTATAAATGAGAATATGGGATTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTAGGATGGGTTCCCGGTGCCCTTCTATCTGAAGACTATACAGCGAATCTCTCTATAGAACGACTTGCTGGACCTTCCATTACTGGCATGCCAGTGTCTATTGATCCACCTGTCATTACCTCAAATTGCATTCCCTCAGTCACTAATGGCTCCAATCAGCAAAGTAATTCATCTCATACTTCAAGGCCTTTTGTTCAAACACATTGCCCTTTAAATGCAGAGACAAATACCTGCCAGGGTTCAGCACTGACACCGGAAACCGGAAAACTGAATCAGATATCCAGCAACCATTGCCAACCAAAGGTTATTCCAATGAATAAAACAAACTTTTCTGGCCAACAAGAGAATAGAGCTGTGGAGGCTGAAGTGATAACCTCAGATCTTGGTTCATGCCTGCAGCAACATTCTATTTCATATAATTCAAGATCTGCACTCAATAACTTGACTGGTTCTGGCACTTTTGGTCAATCTTGTCTAAGTGATGATCATCTAACATTAATGGAGCAACAAATCATATCAGCCATTGGGAATCGAGATAATGTTAATCCTTGTTTTAATGTGTCAAGTACCTTAAACATGCCTCATCTAAACACAGATGGAGGCCATATACTTGGCCACAGTATGAGTTCTAGCAGTGCTCCTTTACTAGGAGGAATTCCCATACGTGGTGGAATGAGTACTCTTTTGAGGTCAAATCTGATTACTAGTCCTGGTTCCAAATCTCCCAAAGCATCTACAGCTGATTTATCTGGAGTAGAAGTTGGGATTGGACTTCAAAATTGTGATTCTTCAACTAAAGCAAGGGGTTGTTCTTTGGCTAATTCGACTAGTCAATCCAGCACTTTTCCCATGCATGTAGAAGGAGGTTCTAATCAGAAGATGCTCCCTGTAGATTTAAAGTGTGTTTCAACAAATCAAAAGATAGACTATGATTTGCTTCAGGCCCCTAACCTCCCCACTTTCCATGTTGAGAAATGTGTGCCCATTAGTGGTCAAATACCTGCTTTTGGCCATGATTGCCATGGTAAAGATGGTAGTATTCAATCTGTGATGGCAATGAATCCTAAACTCAAACTAGATTATACTAAACCTCCATCAGGTGACGACCTGTTTGATGTTTTAGGGGTAGATTTGAAAAACAAATTGCTGAATGGAAATTGGAATAAACTCTTTGCAGACGAATTGGATGCAAATACTGAAAATATGGACAAAAAGTTAGCACCTATGAATATGCCCGGCACAACTACAAATCCTGATATATATTCAGTTAAAGAAGCAATATCAGACAGTGGCATATTTTCTGGGTCAGGAACAGACCACCTCTTGGATGCTGTGGTCTCCAAAGCCAAATCTGTTGTAAAACAGGATTCTGATGACATGTCTTGCAGGACATCATTGACAAGGAATAGTACTTCCTCTGTTCCCTCAACTGCCTGCAGGCCGGTTATGTCTGGTCATTTTCAAGGGGGTTTATTTGATTTTCCTAAGAATGGTGGTAAAACAGGTGTCACAGAAGCTAGTTTTCTTAGATCCAGATGTAACAAGGAAGATGCTGGAAACTGTTCTCAAACTAGTTCTGCTTATGGCTCTCAACTTAGTTCATGGGTTGAAAATAGTGGGAGTGTTAAACGTGAGAATAGTGTTTCAACTGGATACTCAAAGCGCCCAGATGAGGCTTGCAAACCAAATCGCAAAAGACTTAAACCAGGAGAGAATCCCAGACCTCGTCCAAAAGATCGCCAAATGATTCAAGATCGAGTGAAAGAGTTACGAGAAATTGTGCCAAACGGATCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACAGGGGACTCTAAGATTATTAACAAGGAAGGAGGGCTGCTTTTGAAAGACAACTTTGAGGGAGGAGCTACTTGGGCATATGAAGTTGGCTCACAATCAATGGTTTGTCCTATTGTAGTTGAGGATCTGAATCCTCCTCGTCAAATGCTAGTGGAGATGCTTTGTGAGGAGCGAGGTTTCTTTTTGGAAATAGCCGACTTAATCAGAGGATTAGGTTTAACCATATTGAAAGGGGTAATGGAAGCTCACAAGGACAAAATCTGGGCACGTTTTGCTGTAGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTTGTTCGTCTTTTGGAGCAAACGGTGAAGGGGAATGCATCTTCATCCAATGCACTTGATAACATGGTGTATCACACTTTTCCACAGGCTGCTCAGATACCAGCAACTGGAAGACCTAGTAGTTTGCATTGA 2871 0.4148 MGFLLKEALRTLCGRNQWSYAVFWKIGCQNSKLLIWEECYYEPLPCSPPMFGMADLPYQNGGWFSSESQSSQLGIQEEDRVNSLINKMTVNNSVIIAGEGMIGRAAFTGNHQWILSNSFTKDVYPPELYPEVHHQFSAGIQTVAVIPVLPHGVVQLGSFSPINENMGFVNDVKSLILQLGWVPGALLSEDYTANLSIERLAGPSITGMPVSIDPPVITSNCIPSVTNGSNQQSNSSHTSRPFVQTHCPLNAETNTCQGSALTPETGKLNQISSNHCQPKVIPMNKTNFSGQQENRAVEAEVITSDLGSCLQQHSISYNSRSALNNLTGSGTFGQSCLSDDHLTLMEQQIISAIGNRDNVNPCFNVSSTLNMPHLNTDGGHILGHSMSSSSAPLLGGIPIRGGMSTLLRSNLITSPGSKSPKASTADLSGVEVGIGLQNCDSSTKARGCSLANSTSQSSTFPMHVEGGSNQKMLPVDLKCVSTNQKIDYDLLQAPNLPTFHVEKCVPISGQIPAFGHDCHGKDGSIQSVMAMNPKLKLDYTKPPSGDDLFDVLGVDLKNKLLNGNWNKLFADELDANTENMDKKLAPMNMPGTTTNPDIYSVKEAISDSGIFSGSGTDHLLDAVVSKAKSVVKQDSDDMSCRTSLTRNSTSSVPSTACRPVMSGHFQGGLFDFPKNGGKTGVTEASFLRSRCNKEDAGNCSQTSSAYGSQLSSWVENSGSVKRENSVSTGYSKRPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGSKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHKDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNASSSNALDNMVYHTFPQAAQIPATGRPSSLH* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00592 956 MobiDBLite consensus disorder prediction 735 760 - -
Lapu5g00592 956 CDD bHLH_AtLHW_like 749 818 - -
Lapu5g00592 956 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 950 IPR043561 GO:0003700|GO:0006355
Lapu5g00592 956 MobiDBLite consensus disorder prediction 710 760 - -
Lapu5g00592 956 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 175 IPR025610 -
Lapu5g00592 956 MobiDBLite consensus disorder prediction 710 731 - -
Lapu5g00592 956 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 745 794 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00592 Lapu-Chr5 5409816 5417388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00592 546 950 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.768 9.36e-120 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00592 - - gmx:100787748 1550.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00592 5 5409816 5417388 Lapu5g00592 5 5409816 5417388 ECH
Lapu5g00592 5 5409816 5417388 Lapu11g00275 11 5809054 5816967 PCT