Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00557 ATGGCGAGCCACAGAATAGGAGAACTTGGTTTGTCAGAGTCGGGACCTTCAAGTCACCACATCCCTTATGGAGTGCTTCATGGAATTAACACTCCTGTATCAAGTTTAATCAATCAAGGATCTGCTTTTGATTTTGGGGAGCTGGAGGAAGCAATTGTTCTGCATGGAGTTAAGGGTAGAAATGATGATGGCAAAGCATCTTTATTCACGGCCAGACCTGCAGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCAGCAAACCCCAAGAGGTGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGTCTTTCCAGCAAAACTGAGCCCCCCTTTGAGGCAGAATCTCCCATGAGTAAAAAGGCATCTTCTTCAGATCACCAGGCTTTTGATCAGCAGCATCTGCAGCACAGACAGCAACTTCAACAGGATATGGCAAGTGATGCCGCAAGAACAGCCTCTTCACAGAATCAATCAGCAGCCAAATCACAAGAAAAGAGAAAGGGAGCTGGTTCTACATCAGAGAAACCACTTGATGCAAAGACACTAAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCCTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTCCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAAGCAATGTAAGCTCTGCAGGAGCCGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACCACAGGTTAATGGGGGAGCTCCGGAACGGGTTGCAAGTACCCTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTCTCCCACTATGATGAGATTTTCAGACTCAAGGGTGTGGCAGCTAAATCAGATGTATTTCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTCCTCTGGATTGGTGGTTTTAGACCCTCTGATATCATCACGATGCTGATTCAACAATTGGAGCCCCTAGCTGAGCAACAGATAATGGGAATGTATGGCCTGAGACATTCCTCACAGCAAGCGGAAGAAGCACTCTCTCAGGGCCTTGAACAGTTGCAGCAGTCTCTGGTGGACACCATTGCTGGAGGCCCAGTTGTTGATGGTGTGCAACAAATGGTCGTTGCCATGAGCAAACTAGCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGACAACAAACTCTTCACCAGTTATGTCGATTACTCACAGTTCGTCAGGCAGCACGCTGTTTCATTGTCATCGGAGAATACTATGGACGTCTTCGAGCCCTTAGTTCTCTCTGGGCATCAAGACCACGAGATACCTTGATCGGTGATGATAACTCATGCCAAACAACAACAACAGAAATGCAGGTGGTCCAACAACATTCTCAGAATCATTTCTCAAGTTTCTGA 1467 0.4615 MASHRIGELGLSESGPSSHHIPYGVLHGINTPVSSLINQGSAFDFGELEEAIVLHGVKGRNDDGKASLFTARPAATLEMFPSWPMRFQQTPRGGSKSGGESTDSGLSSKTEPPFEAESPMSKKASSSDHQAFDQQHLQHRQQLQQDMASDAARTASSQNQSAAKSQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDCGGVGSNVSSAGAAMFDMEYGRWLEEDHRLMGELRNGLQVPLSDSDMRVMVDGYLSHYDEIFRLKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDIITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRDTLIGDDNSCQTTTTEMQVVQQHSQNHFSSF* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00557 488 PANTHER TRANSCRIPTION FACTOR TGA9 113 458 - -
Lapu5g00557 488 MobiDBLite consensus disorder prediction 88 111 - -
Lapu5g00557 488 Gene3D - 182 231 - -
Lapu5g00557 488 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Lapu5g00557 488 Pfam Seed dormancy control 265 339 IPR025422 GO:0006351|GO:0043565
Lapu5g00557 488 CDD bZIP_HBP1b-like 183 233 - -
Lapu5g00557 488 Coils Coil 202 229 - -
Lapu5g00557 488 FunFam BZIP family transcription factor 182 231 - -
Lapu5g00557 488 Pfam bZIP transcription factor 182 218 IPR004827 GO:0003700|GO:0006355
Lapu5g00557 488 MobiDBLite consensus disorder prediction 170 185 - -
Lapu5g00557 488 ProSiteProfiles DOG1 domain profile. 247 455 IPR025422 GO:0006351|GO:0043565
Lapu5g00557 488 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Lapu5g00557 488 MobiDBLite consensus disorder prediction 120 169 - -
Lapu5g00557 488 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Lapu5g00557 488 MobiDBLite consensus disorder prediction 80 185 - -
Lapu5g00557 488 SMART brlzneu 179 244 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00557 Lapu-Chr5 5060711 5067916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00557 165 488 bZIP Transcription Factor Family AT1G08320 72.923 8.18e-175 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g00557 DOG1 9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00557 K14431 - gmx:100775461 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00557 5 5060711 5067916 Lapu5g00557 5 5060711 5067916 ECH
Lapu5g00557 5 5060711 5067916 Lapu11g00324 11 6256958 6264265 PCT