Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00556 ATGAATTTCCAACAATCAGAGCAGGAGGTGCCGCTGCAAGACACAGAAGCCGGATTTTCTCAACTGAACCAAGAAAATTCAGCACTCTCAGTCACCCTTGACGAGGTCTGTGACCAGAACGGAAAGAGCTTAGGATCCACGATCATGGATGAATTCATAGCCAGCATTTGGAATGCAGATGAGATCCCACCACTACCCATCTATGAAGAAGTTCCAAACAACAGAAGCATTGCACCAGACCCCGTGATTTCGCAGCCAGTCACATTCTCTGTCCCTCCCCCAATTTGCAAGAAAACTGTGGACGAAGTTTGGTGTCAGATCCAGAAAAGCCAACCTCAACCCATTGAACCACTCCAAAGTAATGAAACACTCCAAAGGCAGCCCACATTTGGAGAAATGACTTTGGAGGATTTCCTAGTTAAAGCTGGGGTAGTACGAGAATCAACACTGTTCACTACTTTATTACCTCAGGCTCATTTTGGTAATATGCCAAATAATGTACCACTGAATACAAGTTATATATTAATAGAAACTGCTGGATCTAATGCATCCAGTAGTAGATTTGAACCACATCAAATGCTGCCACAGAATAACAACTTAGTTGTCAAGGATCTCACTGCTACAAGTGCTGCTGGGGAGAGTTCTCAAAACTCAGGAGAATCAAGTGGGACGGGTAAGAAAAGGATAATTGAAGGTCCTTCGGATGTGGTCATAGAGAGAAGGCAGCGCAGAATGATGAAGAATCGAGAATCAGCTGCACGATCTCGAGCAAGAAGACAGGCATATACTGTAGAGCTTGAAGCAGAGCTGACTAATCTGAAAAATGAGAATGAAGAGCTCAAAAAACATCTGGCTGAACGTGAACTCAAGAGAAGAGAAGAGATATATAAGAGAAAGCCCAAAACAATGGCTGAAAAGAGGGCAGAGAATCTGAAGAAATTGAAGAGGCATCAGAGCGCAACCTGGTGA 969 0.4376 MNFQQSEQEVPLQDTEAGFSQLNQENSALSVTLDEVCDQNGKSLGSTIMDEFIASIWNADEIPPLPIYEEVPNNRSIAPDPVISQPVTFSVPPPICKKTVDEVWCQIQKSQPQPIEPLQSNETLQRQPTFGEMTLEDFLVKAGVVRESTLFTTLLPQAHFGNMPNNVPLNTSYILIETAGSNASSSRFEPHQMLPQNNNLVVKDLTATSAAGESSQNSGESSGTGKKRIIEGPSDVVIERRQRRMMKNRESAARSRARRQAYTVELEAELTNLKNENEELKKHLAERELKRREEIYKRKPKTMAEKRAENLKKLKRHQSATW* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00556 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 320 IPR043452 GO:0003700|GO:0045893
Lapu5g00556 322 MobiDBLite consensus disorder prediction 297 316 - -
Lapu5g00556 322 SMART brlzneu 236 302 IPR004827 GO:0003700|GO:0006355
Lapu5g00556 322 MobiDBLite consensus disorder prediction 208 234 - -
Lapu5g00556 322 MobiDBLite consensus disorder prediction 297 322 - -
Lapu5g00556 322 Gene3D - 238 294 - -
Lapu5g00556 322 MobiDBLite consensus disorder prediction 208 224 - -
Lapu5g00556 322 SUPERFAMILY Leucine zipper domain 240 286 IPR046347 GO:0003700|GO:0006355
Lapu5g00556 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 243 258 IPR004827 GO:0003700|GO:0006355
Lapu5g00556 322 Coils Coil 259 295 - -
Lapu5g00556 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 238 286 IPR004827 GO:0003700|GO:0006355
Lapu5g00556 322 Pfam bZIP transcription factor 240 286 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00556 Lapu-Chr5 5052774 5054267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00556 22 322 bZIP Transcription Factor Family AT3G44460 42.540 3.20e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g00556 bZIP_1 2.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00556 K14432 - gmx:100799576 314.694