LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu5g00533	ATGAGATTGGAAAAATGCTGGTTTTGCTCTTCAACTGTATACCCTGGACATGGAATCCAGTTTGTTCGCAATGATGCAAAGATTTTTCGGTTTTGTAGGTCTAAATGCCACAAAAACTTCAAAATGAAGAGAAATCCTCGTAAGGTAAAATGGACCAAGGCATATCGTCGAGTGCATGGAAAGGATATGACACAGGACTCCACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAAAGATATGACAGAAATCTTGCGGAGAATGTCCTGAAGGCTATTCCGAAGATTGATAAGATCAGAGTCACTAGGGAGGAGAGACACCATAAGAATAGGATGAAAGGAAACAAGGAAAAGCTGCTGAAGGAGGCAGTAAAAGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTCAGTGCTTCAACAGGATCCATCTCTCACTTTACCAAAGATCAAGGTCAAGGTTTCTCAACAGCAATCAGAGGAGAATCGTGCCATGGAAGAGTAA	507	0.426	MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGNKEKLLKEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENRAMEE*	169

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu5g00533	168	CDD	Ribosomal_L24e_L24	1	54	IPR000988	-
	Lapu5g00533	168	SMART	4TRASH	6	44	IPR011017	-
	Lapu5g00533	168	SUPERFAMILY	Glucocorticoid receptor-like (DNA-binding domain)	4	56	-	-
	Lapu5g00533	168	PANTHER	60S RIBOSOMAL PROTEIN L24	1	167	IPR000988	-
	Lapu5g00533	168	Gene3D	Ribosomal protein L24e	1	68	IPR038630	-
	Lapu5g00533	168	FunFam	probable ribosome biogenesis protein RLP24	1	67	-	-
	Lapu5g00533	168	ProSitePatterns	Ribosomal protein L24e signature.	8	25	IPR023442	-
	Lapu5g00533	168	Pfam	Ribosomal protein L24e	1	65	IPR000988	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu5g00533	Lapu-Chr5	4833314	4835841	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu5g00533	1	168	Cytoplasmic Ribosomal Protein Gene Family	AT2G44860	69.643	2.11e-84	243

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu5g00533	K02896		-	gmx:100778077	334.724

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu5g00533	5	4833314	4835841	Lapu5g00533	5	4833314	4835841	ECH