Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00482 ATGTGCAAGACGAAGATGGCCACCAACGCCGCAAGTCCCACTCGCACCCCGCGATCACAACAACGCCCCACCACCCAAAGCCCAAGACCCTCCTCCCCAAGGCCCACACTCAGGCCCAACCCTGCGCCCACCACTTCTTTCTCCGACAAACCCTCCACTTCTTACACCTCCACCACCAGCGCTCCCTACACCGGCTCCACCGGCTACCGTCTCTCCTCCGACACCTCCATTGCTAGCCACACCTCCCTCACCTCTCTGCGCGGTACGCTGCCAGAAAACCCCAACATCTACGATTTCTCCGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCCTGCTGGCGCTGCACTCTCCGTGGCGCCGATGTCATTGTCTTCCAGCGCAAGTTCAGCCGTAAACTCCAGATGAATCAGCTCCAGCAACTGCTATCTGTCGTCTGTCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGCGCCTCCGTCTCCGGCGACCATATCTACCTCGTCTACGACTTCGTCAACGGCGCCAGCCTCTCCGATTGTCTCCGCAACAAGAACAACGCGCACTTCACTGTTCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCACGGATCTCGCTCACGGACTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCATAACCGTATCAAATCCAGTGGTATCATCGTCACCGAACCTTCTTTCAACGCTAGGGTTTGCCATTTCGGCACCGCGCAGCTCTGCGGCGAAGTCGACCTTCAAAACGAACAATTAGGCGAAATCAGTGAGATCGTGGAGAAATTGCCGCCGTCTCCGGCGAGATCCAAGCAATTCGAGGGCGTGCGAGGGTACATGGCGCCAGAATTTCAAGCCTCCGGCATTGCGACTCAGAAGTCTGATATATACGCTTTCGGAGTGGTGATCTTGGAGCTCTTGTCCGGGGAGGAGCCACTGAAGTTTAAAATCGACGAGAAGACGCGCGAATTCGTGAGGACGTCGGTGATCGAGACGGCGAGGGGCGCCGTGGACGGCGGCGATGGTAGCGTGCAGGGGAAGCTGAGGAAGTGGGTGGATCGGAGATTGAAAGATTCGTTTCCCGTGGACGTAGCGGAGAAGCTGACACGTGTCGCACTGGAGTGCGTACACGTGGATCCAGATATGCGACCAAACATGGGACGCGTTGCTGGGAAGATCTCGAAGTTTTATTTGACGTCGAGAATATGGTCGGACAGCATTAAGATTCCCGATTTTACTGTTTCGTTGGGTCCTCGTTGA 1314 0.5639 MCKTKMATNAASPTRTPRSQQRPTTQSPRPSSPRPTLRPNPAPTTSFSDKPSTSYTSTTSAPYTGSTGYRLSSDTSIASHTSLTSLRGTLPENPNIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFSRKLQMNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNGASLSDCLRNKNNAHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNRIKSSGIIVTEPSFNARVCHFGTAQLCGEVDLQNEQLGEISEIVEKLPPSPARSKQFEGVRGYMAPEFQASGIATQKSDIYAFGVVILELLSGEEPLKFKIDEKTREFVRTSVIETARGAVDGGDGSVQGKLRKWVDRRLKDSFPVDVAEKLTRVALECVHVDPDMRPNMGRVAGKISKFYLTSRIWSDSIKIPDFTVSLGPR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00482 437 Pfam Protein kinase domain 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00482 437 MobiDBLite consensus disorder prediction 41 67 - -
Lapu5g00482 437 SUPERFAMILY Protein kinase-like (PK-like) 117 407 IPR011009 -
Lapu5g00482 437 ProSiteProfiles Protein kinase domain profile. 88 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00482 437 Gene3D Transferase(Phosphotransferase) domain 1 182 422 - -
Lapu5g00482 437 PANTHER OS09G0572100 PROTEIN 1 437 - -
Lapu5g00482 437 MobiDBLite consensus disorder prediction 1 27 - -
Lapu5g00482 437 Gene3D Phosphorylase Kinase; domain 1 72 180 - -
Lapu5g00482 437 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00482 Lapu-Chr5 4260421 4261968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00482 92 425 Receptor kinase-like Gene Family AT1G51940 30.792 1.49e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu5g00482 Pkinase 5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00482 - - gmx:100792694 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00482 5 4260421 4261968 Lapu5g00482 5 4260421 4261968 ECH