Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00451 ATGTCCGTAATCGACATTCTCTTCCGCGTCGATACCATTTGCCAAAAATATGACAAATACGACATCGACAAGCAGCGCGAGCTCAACGCCTATGGCAACGACGCCTTTGCTCGCCTCTATGCAGCTGTCGAATCCAGCATTCAAACCGCTCTCAACAAATCGGAGGCTGCTTCCACGGAGACCAACAGGGCAGTTGCTGCGGCTTTGAATGCCGAGGTTCGTCGAACCAAGGGTAGACTCATGGATGAGATTCCTAAACTGCGCAAATTGGTGCATAAGAAGGTTAAAGGTCTCACAAACGAGGATACGGCCATTCGTCAGGATCTTGTTCTGGCATTGCCTGAGAGAATCCAAGCAATACCAGATGGTATTTCTGGTGCTTCTGTTCAAACTGCAGGATGGAACGCTACCTCATCTCAGCCACATCTCAAGTTTGACTCATCAGAGCCTCTTGACAGTGAATATTTCCAACAAAGTGAAGAATCCAATCAGTTCCGAGAAGAGTATGAAATGCGCAGGATGAAACAGGATGAAGGACTTGATATCATATCAGAGGGATTGGATACCTTGAAGGATCTTGCCCGTGATATGAATGAGGAAATGGATCGCCAAGTCCCACTAATGGATGAAATAGACAACAAGGTGGATAAGGCAACAGCTGAAGTGAGAAACACTAACGTGAGGCTGAAGAAAACTCTCAACGAGATAAGGTCTAGTCGAAACTTCATCATCGACATCATTCTACTTTGTGTTCTTCTTGGAATCGTTATGTATTTATACAATGCCCTGAGATGA 795 0.4553 MSVIDILFRVDTICQKYDKYDIDKQRELNAYGNDAFARLYAAVESSIQTALNKSEAASTETNRAVAAALNAEVRRTKGRLMDEIPKLRKLVHKKVKGLTNEDTAIRQDLVLALPERIQAIPDGISGASVQTAGWNATSSQPHLKFDSSEPLDSEYFQQSEESNQFREEYEMRRMKQDEGLDIISEGLDTLKDLARDMNEEMDRQVPLMDEIDNKVDKATAEVRNTNVRLKKTLNEIRSSRNFIIDIILLCVLLGIVMYLYNALR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00451 264 Pfam SNARE domain 207 256 IPR000727 -
Lapu5g00451 264 FunFam Putative syntaxin-71-like 170 231 - -
Lapu5g00451 264 SUPERFAMILY SNARE fusion complex 163 231 - -
Lapu5g00451 264 Coils Coil 208 235 - -
Lapu5g00451 264 CDD SNARE_Qc 175 231 - -
Lapu5g00451 264 Gene3D - 170 231 - -
Lapu5g00451 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Lapu5g00451 264 PANTHER SYNTAXIN 60 252 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00451 Lapu-Chr5 3849338 3851521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00451 1 264 SNARE and Associated Proteins AT3G09740 64.286 7.58e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00451 K08506 - gmx:100777251 457.603