Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00444 ATGGAGAGTGACACAAACACCCTTACTTCCTCTCCCACATTCTCTCGCTCCTCTAATACCCCTTCTTCTTCTTCCCCTCCCCAACTTGTCATGAGCCCTTGTGCTGCATGCAAAATCCTTAGGCGAAGATGTGCTGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACCGAACCTGCCAAGTTCACCACTGCTCACCGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTACAGGAACTTCCAGAGTCTCAGAGAGCTGATGCAGTGGCGAGCATGGTTTATGAGGCTGGTGCAAGAATAAGAGACCCTGTATATGGATGTGCAGGTGCAATTTGCCAGCTCCAAAAGCAAGTCAATGAACTTCAAGCACAGTTAGCAAAGGCACAAGCTGAGGTTGTAAACATGCAATTTCAACAAGCCAATCTCGTGGCTCTAATTTGCATGGAAATGTCACAGACTCCACAGGAATCACCACAGCAATCTGTGGACAATCTCATCACAAGTCCTTCCCACAGCAGTGGCTATCAGAACAATCTCAATTTCTTTGAGGATAACACCAACCTAAACTCTTTGTGGGAGCCTCTTTGGACATGA 597 0.4724 MESDTNTLTSSPTFSRSSNTPSSSSPPQLVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQFQQANLVALICMEMSQTPQESPQQSVDNLITSPSHSSGYQNNLNFFEDNTNLNSLWEPLWT* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00444 198 MobiDBLite consensus disorder prediction 1 29 - -
Lapu5g00444 198 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Lapu5g00444 198 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Lapu5g00444 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 161 - -
Lapu5g00444 198 Coils Coil 112 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00444 Lapu-Chr5 3760316 3762102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00444 1 198 AS2 family AT1G07900 62.687 3.60e-81 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu5g00444 LOB 3.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00444 - - gmx:100819336 327.02