Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00439 ATGGAGCAGTTCATCGATAACTTACCGCCGATGGATCTGATGCGATCCGAGAAGATGACTTTCGTTCAGCTCATTATCCCCGTCGAGTCCGCACACCGCGCCATCTCCTATTTAGGCGAACTCGGCCTTCTCCAATTCCGCGACTTGAATGCTGATAAAAGTCCCTTCCAGAGAACATTTGTTAATCAGGTAAAACGATGTGCAGAAATGTCAAGAAAACTACGATTCTTCAAGGATCAAATCAGTAAGGCTGGCTTATTGTCCTCTTCTCGTACTGTATTGCAACCAGATATTGACTTGGAGGATTTGGAGATACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGACAAACTCCGGCAATCATATAATGAACTCTTGGAATTCAAGATTGTATTACAAAAGGCATGTGGCTTTCTTGTCTCAAGTCATAACCTGACCCTTTCAGATGAAAGAGAACTACAAGAGAATGTATTTTCGAATGATGCCTATGTTGAGACAGCATCTTTGCTTGAACAGGAAATAAGGCCTCAGTCTTCAAATTCGTCTGGTTTAAGATTTATCAGTGGGATAATCTGTCAATCCAAGGTTCTTAGATTTGAAAGAATGTTGTTTCGTGCTACGAGAGGCAATATGCTATTCAATCAGGCACCAGCTGATGAACAAATCATGGATCCTGTTTCAGCTGAGATGATTGAAAAAACAGTGTTTGTCGTGTTTTTCTCTGGGGAACAAGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGCAAGCAGAGGCAAATAACCAGAGAGGTTTCATCACGTCTTACAGACTTAGAGGCAACTTTGGAAGCTGGGATGAGGCACCGGAACAAGGCTCTAACTTCTGTAGCAGACTATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTACGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTCTACTTGCCAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTTCATCCACTGGAGGCAGTGGAATCACCACCTACATACTTTCGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATATGGCGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTTCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTTGGAGCATTGATTCTTATAGCACGTGAAAACAAGCTCAACTCACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTAATGGCACTATTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATATTTGGTGCATCAGCATACAAATGCCGCGATAGTTCTTGCAGGGATGCACATACTGTTGGCTTAGTCAAATACCAAGATCCGTACCCGTTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTCCTGAATTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTGACGCATATGAACTTAGGAATTATATTAAGTTATTTTAATGCTCGGTTCTTTGGAAGCTCATTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATTGTTATTAAGTGGTGTACTGGCTCTCAAGCAGACCTATATCATGTAATGATATACATGTTTTTAAGCCCCACGGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTGAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAATTATGGCTTACTGAACACTTCTGAGGTAGATCTTGAGGCCGAGCCTGATTCTGCCAGACAACATCATCATGAAGAATTCAATTTCAGTGAAGTCTTTGTTCACCAAATGATCCACTCCATTGAATTTGTTCTAGGTTCTGTTTCTAATACTGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCTCACTCAGAACTGTCTACTGTTTTCTACGAGAAAGTCCTGCTTCTTGCTTGGGGATATGACAATCTTGTCATTCGGTTGGTGGGGCTTACCGTTTTTTCCTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTGCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGCGATGGCTACAAGTTCAGACCTTTTTCATTTGCCTCCTTAACAGAGGATGAAGATTGA 2463 0.4105 MEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLLSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHNLTLSDERELQENVFSNDAYVETASLLEQEIRPQSSNSSGLRFISGIICQSKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSAEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLEAGMRHRNKALTSVADYLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLLAKTQMQEALQRATFDSNSQVGIIFHPLEAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALILIARENKLNSQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTVGLVKYQDPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVTHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNCLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRNYGLLNTSEVDLEAEPDSARQHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDED* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00439 820 PANTHER VACUOLAR PROTON ATPASES 13 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lapu5g00439 820 Coils Coil 100 127 - -
Lapu5g00439 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lapu5g00439 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00439 Lapu-Chr5 3704128 3714828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00439 1 813 Primary Pumps ATPases(2) AT2G28520 80.613 0.0 1368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00439 K02154 - gmx:100776037 1545.41