Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00431 ATGGGTTGCTTTCGTTGCACAGGCAAATCAAGCAAAAAATCTAACAACAACGTTAATCGCAGCCACAAGCACATTGCTGTTGTCAAAATTGATTTGGAAGTGACTGGTAAAAGGGAAGATATTCACCGTAAGCCTAATCAGCTATCTCTGGACGTGAAGAATTTGAATTTAAAAGAGGTTTCTGATGAAGGAAAAATTACAAGTTACCGGGCACAGACGTTTACTTTTGATGAGCTTGCAGCTGCAACAAGACATTTTAGGACAGATTGCTTTCTGGGTGAAGGAGGGTTTGGCAAGGTTTATAAAGGGCGCATGGAGAAAACAAATCAGGTTGTGGCAATTAAGCAACTAGACCCTTATGGGCATCAAGGAATTAGGGAATTTGTTGTTGAAGTATTGACATTGAGTTTGGCAGATCACCCTAATTTGGTCAATTTAATGGGGTTTTGTGCTGAGGGAGAGCAGAGGCTATTGGTTTATGAGTACATGCCATTGGGATCCTTGGAGAGACATTTGCAGGATCTTCCACGTAGTAGAAAACCACTTGATTGGAATACAAGAATGAAAATTGCAGCTGGTGCTGCTAGAGGTTTGGAGTACTTGCATGATAAAATGAAGCCTCCAGTCATATACCGTGACTTGAAGTGCTCCAATATTTTGTTAGGTGAGGGTTATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTAGGACCAAGTGGTGATAAGACCCACGTATCAACAAGAGTTATGGGAACATATGGGTATTGTGCCCCAGATTATGCAATGACGGGTCAATTGACGTTCAAGTCTGACATTTATAGCTTTGGAGTTGTTCTTTTGGAGATCATCACAGGCAGGAAGGCCATTGACAACATGAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAGACCTTTGTTCAAAGACAGAAAAAGATTCTCAGAGATGGTTGACCCATTGCTTGAAGGTCAGTATCCAGTAAGAGGTTTGTATCAAGCTCTTGCTATAGCTGCCATGTGTGTCCAAGAACAACCTAGTATGCGGCCTGTCATAGCTGATGTGGTTACAGCTCTAAATTACCTTGAATCCCAGAAGTACGATCCCCAAATTCATTCAATTCAAAGCTCTAGAAACGGTTTGTCTTCTTCAAGAGCAAGAAGCAATAAGCATAGACGAACTGTTAGTAATGGTTCTGATCCAAGAGTAAGAGAAGTTGGTCTTAAACTAATTGGTAATGGCCCTAGTAGTGGTTCTGAGACAGAAAGCCCTGTGAAAGGTCTATCTTCTCCAAGAGTGAGAAGTGATGGTCACAGACATTTTCATATTAATGCTTCCGAGGCAGACAGTTCTGGAGATTTAGAAAAATGA 1374 0.4127 MGCFRCTGKSSKKSNNNVNRSHKHIAVVKIDLEVTGKREDIHRKPNQLSLDVKNLNLKEVSDEGKITSYRAQTFTFDELAAATRHFRTDCFLGEGGFGKVYKGRMEKTNQVVAIKQLDPYGHQGIREFVVEVLTLSLADHPNLVNLMGFCAEGEQRLLVYEYMPLGSLERHLQDLPRSRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDNMKPAKEQNLVAWARPLFKDRKRFSEMVDPLLEGQYPVRGLYQALAIAAMCVQEQPSMRPVIADVVTALNYLESQKYDPQIHSIQSSRNGLSSSRARSNKHRRTVSNGSDPRVREVGLKLIGNGPSSGSETESPVKGLSSPRVRSDGHRHFHINASEADSSGDLEK* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00431 457 MobiDBLite consensus disorder prediction 373 457 - -
Lapu5g00431 457 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00431 457 MobiDBLite consensus disorder prediction 415 429 - -
Lapu5g00431 457 PANTHER OS07G0668900 PROTEIN 3 372 - -
Lapu5g00431 457 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Lapu5g00431 457 SUPERFAMILY Protein kinase-like (PK-like) 72 379 IPR011009 -
Lapu5g00431 457 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Lapu5g00431 457 FunFam probable serine/threonine-protein kinase RLCKVII 58 162 - -
Lapu5g00431 457 Pfam Protein tyrosine and serine/threonine kinase 91 305 IPR001245 GO:0004672|GO:0006468
Lapu5g00431 457 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00431 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lapu5g00431 457 MobiDBLite consensus disorder prediction 433 457 - -
Lapu5g00431 457 CDD STKc_IRAK 92 361 - -
Lapu5g00431 457 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Lapu5g00431 457 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00431 Lapu-Chr5 3588171 3591435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00431 1 363 Glycoside Hydrolase AT3G07070 57.065 2.27e-148 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu5g00431 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00431 - - gmx:100794680 738.413