Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00422 ATGATTGATTGGAGAAATATTAGTTTTTTCCTCTGTGCTTTATCAATCTTCCCCCTTTCTGCCACCTTTGTTCCAGAAGATAACTATCTTATAGACTGTGGAGCATCTGCAAGTACTTCAGTAAGTAGGCGCAATTTCACCTCAGATAATTTGTCCAAGGATCTCCTTTCTACACAAGAAGATATTCTTGCCACTTACCCCTTAAAATCAAGTACTCCTTCCTCTGATGATTGGGCTCTCTATCAAACTGCAAGAATCTTCAGTGGATCCTCAAAGTACACCTTTCCAATTAATCAAAAGGGGAGACACTGGATCCGTCTATATTTCTTTCCATTTACTTATGAAAAGTACAATTTGAGTGCTGCAAATTTCACTGTTGCCACACAAGACCATGTCCTTTTCAGTAGCTCCAACATGCAGAAAGATCCTGTGATGAAGGAGTACTCTGTGAATGTGACCTCAGACACCCTTGTTATCACATTTGCCCCTTCTGGCAATTCCACTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGCCCCCGATGACCTCATTGATGACGATTTTTCCGCCTTAGATCCATCGTTAACCTTATCTGGGTTGGTGACACAGACACTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAACTGTGACCCCTATGAATGACACCCTTCAAAGAACTTGGATTCCAGATCAAAGGTTCCTTGTAGAACCTAACCTCGCCTCATTTGCTAGTAATATTGTTGCTGTCAAGTATGAGAAAGGTGGTTCAACAACAGAAAACACCGCTCCCCCTTCTGTTTACGGTACTCTCACACAGATGAACTCAACCTTTGATCCCCGAAATAATTTCAATGTGACATGGAAGTTTGATGTGAGTCCTGGATTTCAGTACCTTGTTCGATTTCACTTCTGTGATGTGGTCAGCAAAGGTCTCAATGTACTCTACTTCAATGTTTATATTGACTCCAAGATAGCTGCCGCTGATGTTGATCTCAGTATTCATAGTAATAATGTTTTGGGTGTTCCATATCATCAGAATTTTGTTACACCGTTGGCTGTCAGCAATACACTTCGTGTAAGTATTGGTCCTTCTAAGTTAAGTAAGGATGTTCCTAATGCTATTTTGAATGGGCTGGAGATCATGAAAATGAACAATTCTATGGGCAGTCTTATCACAGGAGCAGGACCTGTGGCTAGTACTACAGGTACAGGTTCAAGTTCTAAGAGTATTGGCATGATTGTGGGTGTGATTGTTGGGGTAGTTGGTGCAGTTGTCTTGGCTGGAGTTTTCTTTGTATTATGCATGAGAAGAAGAAAGTTGGCTCGGCAAAGGCAGTCAAAGACGTGGGTTCCTTTATCCATCAATGATGGAACTACTTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTAAGTGCTGCTTCAAACTATGAGTACCGTGTGCCTTTTCTTGCAGTTCAGGAGGCTACAAACAACTTCGATGAGAGTTGGGTTATTGGGATAGGTGGTTTTGGTAAAGTGTACAAAGGAGAGTTAAGTGATGGCACAAAAGTGGCAGTTAAGAGGGGGAATCCACGGTCCCAGCAGGGGCTTGCAGAATTCCGAACTGAAATTGAAATGCTGTCTCAGTTTCGCCATCGCCATCTGGTGTCTTTGATTGGTTATTGTGATGAAAGGAATGAAATGATCTTGATATATGAATATATGGAGAAAGGAACTCTCAAGAGTCATTTATATGGTTCAGATCTGCCTAGCTTAAGCTGGAAGGAGAGGCTTGATATATGCATTGGATCAGCTAGAGGACTTCATTATCTTCACACTGGCTATGCTAAAGCTGTTATTCACCGTGATGTGAAGTCTGCAAATATACTACTTGATGAGAAACTAATGGCTAAAGTCGCAGATTTTGGATTATCAAAGACAGGGCCTGAAATTGACCAGACACATGTTAGCACAGCTGTCAAAGGTAGTTTTGGGTACCTTGATCCAGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCAGATGTTTACTCATTTGGGGTAGTTCTGTTTGAAGTTCTTTGTGCAAGGCCTGTCATAGATCCAACACTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCAATGAAATGGCAGAAGAAAGGGCAGTTGGAGCAAATCATAGATCAAACACTTGCAGGCAAAATCAGGCCTGATTCTCTAAGGAAGTTTGGTGAAACTGCTGAGAAATGCTTGGCTGACTATGGTGTTGACAGACCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAGCTTCAAGAGGCCGTGGTTCAAGGTGATCCTGAAGAAAACAGCACTAACATGATTGGTGAACTCTCTCCACAGATCAACAATTTCAGCCAGGATGCCAGTGCTTCTACTGCACAATTTGAAGGCACAAGTCTGGATGATCTCTCTGGTGTTTCTATGAGTAGGGTCTTCTCACAATTGGTGAAGTCTGAGGGTAGATAG 2514 0.4216 MIDWRNISFFLCALSIFPLSATFVPEDNYLIDCGASASTSVSRRNFTSDNLSKDLLSTQEDILATYPLKSSTPSSDDWALYQTARIFSGSSKYTFPINQKGRHWIRLYFFPFTYEKYNLSAANFTVATQDHVLFSSSNMQKDPVMKEYSVNVTSDTLVITFAPSGNSTAFVNAIEVVSAPDDLIDDDFSALDPSLTLSGLVTQTLETVWRVNMGGPTVTPMNDTLQRTWIPDQRFLVEPNLASFASNIVAVKYEKGGSTTENTAPPSVYGTLTQMNSTFDPRNNFNVTWKFDVSPGFQYLVRFHFCDVVSKGLNVLYFNVYIDSKIAAADVDLSIHSNNVLGVPYHQNFVTPLAVSNTLRVSIGPSKLSKDVPNAILNGLEIMKMNNSMGSLITGAGPVASTTGTGSSSKSIGMIVGVIVGVVGAVVLAGVFFVLCMRRRKLARQRQSKTWVPLSINDGTTSHTMGSKYSNGTTLSAASNYEYRVPFLAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKSHLYGSDLPSLSWKERLDICIGSARGLHYLHTGYAKAVIHRDVKSANILLDEKLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLEQIIDQTLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFSQDASASTAQFEGTSLDDLSGVSMSRVFSQLVKSEGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00422 837 FunFam Receptor-like protein kinase FERONIA 204 387 - -
Lapu5g00422 837 FunFam Putative receptor-like protein kinase 28 180 - -
Lapu5g00422 837 FunFam receptor-like protein kinase FERONIA 461 572 - -
Lapu5g00422 837 Gene3D - 26 180 - -
Lapu5g00422 837 Gene3D - 203 387 - -
Lapu5g00422 837 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Lapu5g00422 837 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Lapu5g00422 837 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00422 837 Pfam Malectin-like domain 31 385 IPR024788 -
Lapu5g00422 837 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Lapu5g00422 837 FunFam Receptor-like protein kinase FERONIA 573 788 - -
Lapu5g00422 837 PANTHER OS07G0166700 PROTEIN 484 774 IPR045272 GO:0004714|GO:0006468
Lapu5g00422 837 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00422 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lapu5g00422 837 CDD STKc_IRAK 503 768 - -
Lapu5g00422 837 Pfam Protein tyrosine and serine/threonine kinase 502 709 IPR001245 GO:0004672|GO:0006468
Lapu5g00422 837 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00422 Lapu-Chr5 3501557 3505218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00422 7 837 Receptor kinase-like Gene Family AT3G46290 64.558 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu5g00422 Malectin_like 1e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00422 - - gmx:100305416 1377.46