Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00418 TCACTGTGCTGCCGCAATGTGCAGGGAAAGGGAACAGGGAGTTTCGGTAAGAGGAGGAACAAGACCCACACCCTCTGTGTGAGGTGTGGCCGTCGCAGCTTTCACCTCCAGAAGAGTCGGTGTGCCGCCTGTGCTTTCCCCGCCGCGCGCACCAGAAAATATAACTGGAGCGTGAAGGCTATCAGGAGAAAGACTACTGGAACTGGAAGGATGAGGTACCTGCGTCACGTGCCTCGCAGATTTAAGAGCGGCTTCAGAGAGGGTACCGAGGCTGCACCAAGGAAGAGGGGAGCTGCTGCCACTGCCTAA 309 0.5728 SLCCRNVQGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAAATA* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00418 102 SUPERFAMILY Zn-binding ribosomal proteins 9 62 IPR011332 GO:0006412
Lapu5g00418 102 ProSitePatterns Ribosomal protein L37e signature. 11 30 IPR018267 GO:0003735|GO:0005840|GO:0006412
Lapu5g00418 102 Hamap 50S ribosomal protein L37e [rpl37e]. 9 60 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lapu5g00418 102 FunFam Ribosomal protein L37 8 95 - -
Lapu5g00418 102 Pfam Ribosomal protein L37e 10 60 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lapu5g00418 102 Gene3D - 8 94 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lapu5g00418 102 PANTHER 60S RIBOSOMAL PROTEIN L37 9 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00418 10 102 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 84.946 2.82e-55 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00418 K02922 - csv:101221537 174.481