Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00417 ATGCCGAAAATGGGACTCAAAAGCTTCTTCTTCTTTAAAACATCACCATCGCCACCTTCCGCAAAGTCCTTCTCCCATTCGTTAATGGACGAAAACATTGAAACTGCTCGCTCCATCATTTCCAAATGGGACCTTGTAGCTCCTTCTCTCTATCCAACAACCGTTCCTCTTTTCAGCAACACGCGTCAGGAAGCCAAACAGTACCTTAACGCCGTTATGAGTCTGCAGTCCACTATGCAGCACCTTGTCGCCCTCGATTCCTCCTCTGAGAGCCTCGTTCAAGCGCAGTTCCTCATGCAACTTTCCATGAAGAGGCTCCAGGCCGAATTCTATCGGATTTTAGCCGAAAACAGGGACAATCTGGATCCTGCATCTGTCACCTCCACCGATCGGCGGAGCAGCAGTGTCTCCGAAGACGACGACAATTCGTCCGAGGACGACTTCCGCTTCGCCGGAGGCTCGGTATCCACTGTCGCCATGGCGGATTTGAAAGCAATTGCGGAGTGTATGATTTCCGCGGGCTACAGCAAAGAGTGTATCAAGATTTACGTCATAATGAGAAAATCTATCGTGGATGAGGCGCTGTATCATTTCGGAGTGGAGAGGCTGAGTTTCTCTCAGGTTCAGAAGATGGACTGGGAGGTTCTGGAGTCCAAGATTAAGTGCTGGCTGAACTCCGTTAAGGTCGCCGTCCGATCTCTGTTTCACGGCGAGAGAACACTCTGCGACTATGTCTTCGGTTCACCGGAAAGGACTATCGCGGAGTCGTGCTTTGCCGCGATTTGTAGAGATGGCGCGGCGGCGCTGTTCGGGTTTCCGGAGAACGTGGCGAAGTGCAAGAAAACGCCAGAGAAAATGTTCAGGACTCTGGACTTGTACGAAGCGATCTCTGAAAACCGGCAACAAATCGAGTCCATCTTCTCGTCGGAATCAACCTCCTCCATAAGATTGCAGGTATGCGCTTGTCAGGCGAGGCTCGGCGAGGCCGTTCGAACGATGTTAATTGATTTCGAATCTGCGATTCAGAAGGAATATTCGAAGATTCCCGTGCCTGGTGGCGGAATCCACCCGCTGACGCGATACGTTATGAACTACATTGCGTTCCTCGGCGATTACAGTGACGCGCTCGCAGAGATAGTGGCCGATTGGCCGCTGAACCCGTTGCCCGAGTCTTACTACCGCAGTTCCGATCACAAGGGAACAAGTGGCTCGCCGGAGATAGCTGAACGGATAGCGTGGCTGATATTAGTGCTCCTCTGCAAAGTCGATGGCAAAGCGGAACTGTACAAGGAGGTTGCACTCTCTTACCTGTTTCTCGCAAACAACATGCAATACGTCGTCGTGAAAGTGCGAACCTCGAACCTAGGGTTCATCCTCGGTGAGCATTGGTTAACGAAACACGAGCTGAAGGTGAAAGAGTACGTTTCCAAGTACGAGCGCGTTGGGTGGAGCAAGGTTTTCTCGTCGCTCCCGGAAAACCCGACAGCAGAACAAGCGAGGGCGATTTTCGAGAGTTTCAACGTCGCATTCCATGAAGCGTGCAGGGCACAGTCCTCGTGGGTCGTACCCGACCCGAATCTGCGAGACGAAATAAAAGCATCCATAGCTGAGAAGTTAGAGCCGACATACAAAGAATTCTTCGAGAAATACCAAGTCGGGTCGGATTCAGTTTTGGGATTTTCACCCGCCGATTTGAGAAACGATCTTTCAGATATCTTATCAGGTTGCGTTTCTTCGTCGCATACTACTCCTTCTCCTCCGCATCGCTTCAAACGCCGGTGA 1782 0.5135 MPKMGLKSFFFFKTSPSPPSAKSFSHSLMDENIETARSIISKWDLVAPSLYPTTVPLFSNTRQEAKQYLNAVMSLQSTMQHLVALDSSSESLVQAQFLMQLSMKRLQAEFYRILAENRDNLDPASVTSTDRRSSSVSEDDDNSSEDDFRFAGGSVSTVAMADLKAIAECMISAGYSKECIKIYVIMRKSIVDEALYHFGVERLSFSQVQKMDWEVLESKIKCWLNSVKVAVRSLFHGERTLCDYVFGSPERTIAESCFAAICRDGAAALFGFPENVAKCKKTPEKMFRTLDLYEAISENRQQIESIFSSESTSSIRLQVCACQARLGEAVRTMLIDFESAIQKEYSKIPVPGGGIHPLTRYVMNYIAFLGDYSDALAEIVADWPLNPLPESYYRSSDHKGTSGSPEIAERIAWLILVLLCKVDGKAELYKEVALSYLFLANNMQYVVVKVRTSNLGFILGEHWLTKHELKVKEYVSKYERVGWSKVFSSLPENPTAEQARAIFESFNVAFHEACRAQSSWVVPDPNLRDEIKASIAEKLEPTYKEFFEKYQVGSDSVLGFSPADLRNDLSDILSGCVSSSHTTPSPPHRFKRR* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00417 593 Pfam Exo70 exocyst complex subunit 222 570 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu5g00417 593 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 569 IPR004140 GO:0000145|GO:0006887
Lapu5g00417 593 SUPERFAMILY Cullin repeat-like 58 571 IPR016159 -
Lapu5g00417 593 MobiDBLite consensus disorder prediction 122 148 - -
Lapu5g00417 593 Gene3D Exocyst complex component Exo70 39 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00417 Lapu-Chr5 3446136 3448284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00417 11 575 EXO70 exocyst subunit family AT5G59730 48.339 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00417 K07195 - gmx:100801773 907.516