Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00416 ATGGCGAGAATCAAGGTGTACGAGCTGAGGAGCAAAACCAAAGCAGAGCTTCTGAACCAATTGAAGGATCTCAAAGCAGAACTCGCTCTCCTCCGCGTCGCTAAGGTCACCGGCGGAGCCCCAAACAAGCTATCAAAAATGTGCCTTCCCTCTCTCTTTGATGTCAAGTTCCTAATTACTAATTTAATTCATTTTTTTATGAATTTAAATGTATTTGTTTTGTGGATGCAGAAAAGTGGTTCGGCTTTCGATAGCGCAGGTTCTGACGGTGATTTCCCAAAAGCAAAAAGCAGCGTTGAGGGAGGCTTACAAGAACAAGAAGTACCTTCCTTTGGATCTGCGTCCCAAGAAGACCAGGGCTATCAGAAGGCGCCTAACAAAACATCAGGCTTCATTGAAGACAGAGCGTGA 411 0.4501 MARIKVYELRSKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKMCLPSLFDVKFLITNLIHFFMNLNVFVLWMQKSGSAFDSAGSDGDFPKAKSSVEGGLQEQEVPSFGSASQEDQGYQKAPNKTSGFIEDRA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00416 136 Gene3D - 1 52 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lapu5g00416 136 MobiDBLite consensus disorder prediction 83 136 - -
Lapu5g00416 136 MobiDBLite consensus disorder prediction 108 126 - -
Lapu5g00416 136 SUPERFAMILY Ribosomal protein L29 (L29p) 4 47 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lapu5g00416 136 Pfam Ribosomal L29 protein 8 46 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lapu5g00416 136 Coils Coil 7 34 - -
Lapu5g00416 136 PANTHER 60S RIBOSOMAL PROTEIN L35 1 47 IPR045059 GO:0000463|GO:0022625
Lapu5g00416 136 NCBIfam 50S ribosomal protein L29 8 46 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00416 Lapu-Chr5 3429551 3432114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00416 1 47 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 82.979 1.02e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00416 K02918 - gmx:100789845 87.8113