Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00407 ATGCCGATTTCTAGAATTGCCGTTGGAAATTCTTCGGAGTTGAGCCAGGTGGATGCGCTTAAGGCTGCTCTTGCTGAGTTCATCTCAATGCTCATTTTTGTTTTTGCCGGGGAAGGCTCTGGCATGGCTTTTAATAAGCTCACAAACAATGGTTCAGCAACACCAGCAGGGTTAGTGGCTGCGTCACTGTCACATGCATTTGCACTTTTTGTTGCTGTCTCAGTTGGTGCAAACATTTCTGGTGGCCATGTGAACCCTGCTGTCACTTTCGGTGCTCAGTTACTTGGCTCTGTGGTTGCTTGCTTGCTCCTTAAATTTGCCACTGGTGGAATGGAAACATCTGCATTTGCGCTTTCTTCTGGTGTTGGAGCAGGGAACGCTCTAGTGTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACGGTGTACGCAACTGCAGTGGATCCAAAGAAGGGTGACATTGGCATAATTGCTCCAATTGCAATTGGTTTCATAGTTGGTGCTAACATCTTAGCTGGTGGTGCATTTGATGGTGCTTCCATGAACCCTGCAGTATCTTTTGGGCCTGCTGTTGTGAGTTGGACTTGGGCTAACCATTGGGTTTATTGGGTCGGCCCATTCGCTGGTGCTGCCATTGCTGCTGTTGTCTACCAGATTTTGTTCATCACCCCAAACACTCATGAACAGCTCCCAGTCACTGATTATTAG 708 0.4718 MPISRIAVGNSSELSQVDALKAALAEFISMLIFVFAGEGSGMAFNKLTNNGSATPAGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAQLLGSVVACLLLKFATGGMETSAFALSSGVGAGNALVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWVGPFAGAAIAAVVYQILFITPNTHEQLPVTDY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00407 235 Gene3D Glycerol uptake facilitator protein. 4 235 IPR023271 -
Lapu5g00407 235 FunFam Probable aquaporin TIP1-1 4 235 - -
Lapu5g00407 235 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu5g00407 235 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu5g00407 235 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu5g00407 235 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu5g00407 235 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu5g00407 235 SUPERFAMILY Aquaporin-like 15 227 IPR023271 -
Lapu5g00407 235 Pfam Major intrinsic protein 92 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu5g00407 235 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Lapu5g00407 235 PANTHER AQUAPORIN-8 6 230 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00407 Lapu-Chr5 3357261 3358335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00407 1 235 Major Intrinsic Protein MIP AT4G01470 74.603 3.70e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00407 K09873 - gmx:547794 415.616