Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00377 ATGGGAAAGGACTTGATTTCTTCAGACCAGACCGCTGTTCATATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTAAAATTCTTGATTACCATAGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAGACATGCCACATATAAGAGAAAAACCATTTTGTATAACCAACTTGAAGACCAACAAGATGGAGTTACAGAAGCAGAACCCCTCCTGGTCAGACAAGATACCGAAAAATTGCATGCTGCAGGAAAAAGTTCTCCCAAATATCGCGAAAAGGAAACACGAACTGGGAAAAATTTTAACAAAGAAAACTCCAAAGGCAGGGTTACCATGGACTACTCGAAGAAAAACCAGGCCAGTAGTGAGTATGCACTTCATCTGGAAAAAAATGGAAAGACAACAGGAGGTTCTCTTGACCATAAGCCTATGGAAACAAACAAGCATAATGTAGACATTTCCGATAAATTTGAGAAACATACTGATGTTTTTGAGTTTCTTAGGGTGGAGAAGGATTTATTACTCAAATTTCTACGAGACATAGACTTTAGTGGGAAAAAACTCCATCAACCTCCCCAAACCAAAGCAAGATTGACAAAATGTGGGTCATTTCCTTTAGCCTCAACTTCACAAATGAGAAACATTAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTATCCAAAGGGAGAAAAATTGTTTGCTGGTACCCAAGAATCAAACATGTCGAGGTCCAGTTTTGTGAAGGATACTTCTTATGAGAAGCCACTGACAATAGTGAGCGATCTTGGTGTGGATAGTGCCATGAAACAAAAAGCTATCATTTCTTCAAGGTCTTCTCAGGAATCAAATCACAAAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGCTATAAAACAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGTGGTTACCAAACTTCTGCTGAAGCTATCCACCACAGAGCTTCACCTGAATATAGCATCATCAATAATGAGAAAGAGATTTCACAACCCTTAGAAGATGGCGTGGTTCAAGAATACAAAAGGAGCAAAAGCTCAAATGCTACTAAAGCTTCTGATTATGATTCCAACAAACATGATGCCCGGCTCATGCGAAGAACATCTTCCCTGAATGAATCATTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCAAAGAAGCTAAGTGGAAAAACTCGAAGTCTAAAAGCTTGAAATTGACACACGAAGATAGGATCCACAAGACTGCGCATGTTCCGAAGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTGTACAACAGGCACTTTTTGACACAAATGATATAGGGAATACAGTGGAAACTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTAAAGATGGACAAACCACTTGATCATTTTAAAGAGGCTGAAATTGTGGAAACAGATTTTATTTTGGAGAAAATTGATGAAGAAGTTACCAGTGACCCAAAGGAGGACATGCATGAGCCAGCAGTGGGGGATGGAAGTTTTACCCAAGAAAAAGAGGAAATGAGTAATATGACTGCCTATCATAGCAAGGAGATGATGCCAACTCTTGAAACTAGCTGTGAGGACAATATAACCAGCCATTCAGAAGGTACAGAATTGTATACCCGAATCTCTACATTGGACGAATTGGAAACTGACTTATCAGATAAAGGAAGTGTAATGCCAGACTCTCCATCCAACAGAAACACTTGTGTAATAACAGCAGAAGATACAGACTACCCTTCCAATTTCAAATATGTGAAAAATGTTCTTGAATTTTCGGGATTCTTGGGAAATGAGCACACTCAGATGCGATACACAATAGACCAGCCACTAAAGCCCTCCTTGTTCAAAGATTTGGATGCGAGTTTGCGCCATGAAATTGAACCCTCTGAAGAAGAGACAATCAACCCTTATGATCACCAACTCATTTTTAACTTAGTGAACGAGGTGCTGCTCGAAATTTATGGAAGATCCCCAACTTACTTCCCAATACCATTCTCCTTCAACCCCCGCCTCCATCCAATGCCTAAAGGGCACTATCTTCTGAATGAAGTGTGGACTAGTGTCAATTCATACCTGACCTTGAGACCTGAGCTAGATCAGACACTAGATGATGTTGTGGGTCGTGATTTGGCAAAAGGAAGAGGGTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAACTGGAAGAGATGATAATGGATGATTTGTTAGATGAATTTATCTACTCATGA 2310 0.3961 MGKDLISSDQTAVHIQDNNPGCMWGMLKILDYHSWRVKKVFPHKRRRHATYKRKTILYNQLEDQQDGVTEAEPLLVRQDTEKLHAAGKSSPKYREKETRTGKNFNKENSKGRVTMDYSKKNQASSEYALHLEKNGKTTGGSLDHKPMETNKHNVDISDKFEKHTDVFEFLRVEKDLLLKFLRDIDFSGKKLHQPPQTKARLTKCGSFPLASTSQMRNISSRSLKHKQNEIYPKGEKLFAGTQESNMSRSSFVKDTSYEKPLTIVSDLGVDSAMKQKAIISSRSSQESNHKGWNQLVLHQFKAIKQKIKHALVEFRKSGYQTSAEAIHHRASPEYSIINNEKEISQPLEDGVVQEYKRSKSSNATKASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSKEAKWKNSKSKSLKLTHEDRIHKTAHVPKFSRSNLSMPNLETLGFIVQQALFDTNDIGNTVETYNRVHRKSVSLPLKMDKPLDHFKEAEIVETDFILEKIDEEVTSDPKEDMHEPAVGDGSFTQEKEEMSNMTAYHSKEMMPTLETSCEDNITSHSEGTELYTRISTLDELETDLSDKGSVMPDSPSNRNTCVITAEDTDYPSNFKYVKNVLEFSGFLGNEHTQMRYTIDQPLKPSLFKDLDASLRHEIEPSEEETINPYDHQLIFNLVNEVLLEIYGRSPTYFPIPFSFNPRLHPMPKGHYLLNEVWTSVNSYLTLRPELDQTLDDVVGRDLAKGRGWMILQEEEEYVALELEEMIMDDLLDEFIYS* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00377 769 MobiDBLite consensus disorder prediction 80 109 - -
Lapu5g00377 769 MobiDBLite consensus disorder prediction 80 106 - -
Lapu5g00377 769 PANTHER PROTEIN TRM32 1 769 IPR044257 -
Lapu5g00377 769 Pfam Domain of unknown function (DUF4378) 606 765 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00377 Lapu-Chr5 3127613 3132560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00377 165 759 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 26.504 2.67e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00377 - - vum:124834749 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00377 5 3127613 3132560 Lapu5g00377 5 3127613 3132560 ECH