Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00365 ATGGATATAAGAGTCTCCTCCACCATCAATATTACTAATGATGCAGAAGAATCTTGCTTGGATGAGAGTGATGTCTCCGCTGTGCTTGGTTACATAAATCAAATGCTCATGGAGGAGGACACAGAAGAGAAGTACAGTATGTTCCATGATTCCTTAGCTCTCCAACATACTGAGAGATCATTTTATCAGGTTATCACTCACCACAACCCTTCTTCTTCCTCCTCCTCCTCTTCCACACACCATAATGTTCACAGCTGCCCCAGTTCCAGTGTGGCCAGCCCTGAGCAAAATGTCTCTGGCAGCTCCAGTGATAATAGTACTGGTAGCTGTGGCAGTACTTCCATCTCCGCTGAGTCTCAGTGGAGAAGCTTTGACCACAACACCCCCGCACTACCAAACACTTTTACCTTTCCAGATAACTTTGTTTTCCACTCAAATCCAACCTCCACCACTCAATCTTCCATGAACAATGGATTTGGATTCTTAGATCATTCCCTTCTTGATTCTGCATTTCAAGAGCATTTCAAGAGAGGTCTGGAGCAGGGTACCAGGTTCCTTCCTAAACATACTCCATTCGTTGTTGACACGGACAGCACAGCCTTTTCCCCTTTTGTCACAAATGTTCCAACTGTTTTAATTAAGACAGAAACAGAAGACAGTGTTGAAGGGGAGCATTTTCTGTCTGTGTCAAAACGGAGAAATCGGGATCAGGAAGAGTATGAAGCAGATGGGAGAATCAGGAAGACATCAGCAACATACATGGATGACAGTGAACTATCTGAATTGCTTGATAAAGTGGTTCTAGGCACTGGGTTGGGAAAAGGGGTGCCTCCTGACACAGGCCTTTACCAAAATGATGAAACATTGTTAACAAACATGTTTGGTGGGGAGGTCAGGAAAAGTGAGGAGGTGGAAGTTGTGGATCTGAGGGCACTATTGATACTTTGTGCACAAGCTGTTGCTTCTGATAGTTCTTCATTTGCAAAGCAACTAGTAAAGCAGATTAAGCAGCATTCTTCTCCAATAGGGGATGATACTCAGAGGCTTGCACATTACTTTGGAAATGCTCTTGAAGCATGCTTGGATGGAACCGGTTACCAGGTTTATAGTGTTCTATCCTCCAAAAGAATCTCTGCCAAAGACATGATAAAAGCTTACCGTGTATATGCTTCAGTGTGCCCGTTTGAAAAGATGGCAATCATGTTTACCAACAAATCAATTAGGAATCTAGCTAAGGATGCAGAAACAATTCACATCATAGACTTTGGTATCCGCTATGGCTTCAAGTGGCCTGCATTTATTAGCGTACTATCGAGACGTCCTGGTGGACCACCCAAGCTACGCGTCACGGGGATAGATCAGCCACAACCAGGTTTCAGGCCAGAGGAGAGGGTGCTGGAGACGGCGCGTAGACTTGAAAATTATTGCAAGCGTTTCAATGTTCCATTTGAGTTCAATGCTATTGCAAGAAGATGGGACACCATTAGATTTGAGGATCTCAAGATAGAGAAAAACGAATTTGTGGCTGTGAACTGCATGTTTCAGTTCGAGCATCTACTTGACGAGTCTGTGGTGTTGGATAATCCAAGGGATGCTGTTTTGAGGTTGATCAAGAAGGCAAATCCTGACATATTTGTGCACAGCATTGTCAACGGATCTTATGATGTACCATTCTTTGTGTCACGGTTCCGAGAGGCTCTCTTTCACTACTCTGCACTGTTTAACATGCTTGAGACAAACGTTGATCGTGAAGATCCCACGAGGTTGATGTTTGAGAAGGAGTTGTTTGGTCGGGAGATCATGAACATCATAGCTTGTGAAGGTTGTGAGAGGGTTGAGAGGCCGCAAACATACAAGCAATGGCAGCTTCGAAACATGAGAATTGGGTTTCGATTACTTCCTTTGGATCAAAAAATCATTGACCAATTAAAGGATAGGTTGAGAAATGATGCGCACAACACTAATTTCATGCTTGAGGTGGATGGTGATTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTGCATGCTTCCTCTTGTTGGATTCCGGCATAG 2052 0.4401 MDIRVSSTINITNDAEESCLDESDVSAVLGYINQMLMEEDTEEKYSMFHDSLALQHTERSFYQVITHHNPSSSSSSSSTHHNVHSCPSSSVASPEQNVSGSSSDNSTGSCGSTSISAESQWRSFDHNTPALPNTFTFPDNFVFHSNPTSTTQSSMNNGFGFLDHSLLDSAFQEHFKRGLEQGTRFLPKHTPFVVDTDSTAFSPFVTNVPTVLIKTETEDSVEGEHFLSVSKRRNRDQEEYEADGRIRKTSATYMDDSELSELLDKVVLGTGLGKGVPPDTGLYQNDETLLTNMFGGEVRKSEEVEVVDLRALLILCAQAVASDSSSFAKQLVKQIKQHSSPIGDDTQRLAHYFGNALEACLDGTGYQVYSVLSSKRISAKDMIKAYRVYASVCPFEKMAIMFTNKSIRNLAKDAETIHIIDFGIRYGFKWPAFISVLSRRPGGPPKLRVTGIDQPQPGFRPEERVLETARRLENYCKRFNVPFEFNAIARRWDTIRFEDLKIEKNEFVAVNCMFQFEHLLDESVVLDNPRDAVLRLIKKANPDIFVHSIVNGSYDVPFFVSRFREALFHYSALFNMLETNVDREDPTRLMFEKELFGREIMNIIACEGCERVERPQTYKQWQLRNMRIGFRLLPLDQKIIDQLKDRLRNDAHNTNFMLEVDGDWVLQGWKGRILHASSCWIPA* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00365 683 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 254 671 IPR005202 -
Lapu5g00365 683 MobiDBLite consensus disorder prediction 67 114 - -
Lapu5g00365 683 Pfam GRAS domain family 309 680 IPR005202 -
Lapu5g00365 683 ProSiteProfiles GRAS family profile. 300 681 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00365 Lapu-Chr5 3033267 3035573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00365 28 683 GRAS Transcription Factor Family AT1G07530 45.686 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu5g00365 GRAS 2.4e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00365 - - gmx:100780343 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00365 5 3033267 3035573 Lapu5g00365 5 3033267 3035573 ECH
Lapu11g00584 11 9139021 9142486 Lapu5g00365 5 3033267 3035573 PCT