Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00364 ATGGATCCAAACACTGTCATAAGCGGCTACGAGTTTGATGAGTGGGATCTCAATGGACACTACACCAACCTCGTCACTGATCCTTTTTTCTATCAGTCCGATGTGGGCCCACCTGAGTTTTCTCCGGATACAATCTTAAACTCCGACCCGCTTGTTTCATCCTCCGCCACCATGGCGCCTGCGGTTGAGGAAGATACTGATTTTTCAGAAACCTTCAAGTTCATAAGTCAAATTCTTATGGAAGAGAACTTTGAACAGAAACCGTGCATGTGCTATGACCCTTTGACTCTGCAACACACTGAGAAATCATTCTATGATGCTTTGGAATTGGAACCGTCACTGCCTCTTTCCCCTTATCAGCACCCGCTTGAGAGCCCCGATGGTAATTCTTCCAATTCCACCACTGATTCAGCCAATTCTCACGACTTGAAGCCTTCTTCACCCAATACACCTGTTTCTGGTGGTGGTGATGCTTTGCATTCCTCTACCCACGCGCCCTCTTTTTTTGTTCCTCCGTCTGCTTTGACTAAAATTAACGATGGAACCCTGGATTTGGATTCTTCTGCGAGCAAGCTCTTGGCTGAAAATATTTTCAGTGATGCAGAATCTATGTTGCAGTTTAGAAGAGGGTTGGAGGAGGCTAGCAAGTTTCTTCCTCAGAGACCTCAGCTTTTCACTGGGTTGGAGAGCACCACGGTTTCTGCGGAACCAAAGGAAGGAAGGGGGTTAACTGTGAAGCTGGAGAATTCAACTGGGGTGAAGAGTAGAAAGAATCACGCGCGCCAAGAGGAAGAAGAAGGAAGAAGCAAGAAACACTCCGAGGTTTGTGTTGATGAGGAGAATGAAATATCTGAAATATTTGATAAGGTGTTGCTTAGTGTTGAAAATGTGCCACTGTGCGCTGAGAAGAATGTATCGGTGGCAGTGGAAGATATTAACACAAAGCTGAGTGAGCAACTGCTTTCGGTTGATGGAGGGAAGGTTCGTTCCAAGAGGCAAGGGAAGAAGAAGGAAACAGTGGATTTGAGGACCCTTCTGGTTCTGTGTGCACAAGCTGTGTCTTCCAGTGACAACAGGACTGCTAATGAACTATTGAAGCAGATTAGGCAGCATTCTTCTGCCTTGGGTGATGCCTCACAAAGGATGGCTCATTATGTGGCCAATGCTTTGGAGGCTCGCTTGGTTGGTGCTGGAACTGGAACACAGATATTTTATATGAGCTACAAGACCTTCACTACTACTGATTACCTGAAAGCTTACCAAGTTTTCATATCTGCCTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAATGATTATGAAAACAGCAGAAAAGGCAGAAACTCTTCATATTATTGACTTTGGTATCCTGTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAGTAGAATTGGAGGGCCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCCCAACCCGGTTTTCGCCCATCTGAAAGAATCGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAAGCGATTCAATGTTCCATTCGACTACAAGGCCATACCATCAAGAAACTGGGAAACCATTCAAATTGAAGACCTTGAGATTGAGAGCAATGAGGTGCTTGCTGTGAACTGTCTGGTAAGGTTTAAGAATTTGCTTGATGAATCAATTGAAGTGAGCAGTCCCAAAAATGCTGTTCTGAATTTAATCAGGAAGATGAATCCGCATATTTTTGTTCACTCCGTGGTAAATGGATCTTATAATGCCCCTTTCTTTGTCACGCGCTTCCGGGAAGCACTGTTCCATTACTCTTCAATTTATGATATGTTTGATACTCTCGTATCCCGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAATTTTTGGGTCGGGAGATCATGAATGTTGTAGCATGTGAAGCCCTTGAGAGGGTTGAGAGGCCAGAGACATACAAACAATGGCAGGCTAGGAATACTAGAGCTGGTTTTAGGCAGCTCCCACTAGACAAGGAGATAATGGCCAAATTTAGGGGCAAGTTAAGGGAATGGTACCACAAGGATTTTGTCTTTGATGAAGATGGCAGCTGGATGCTTCAAGGTTGGAAGGGTCGCATTTTGTATGCTTCAACTTGTTGGGTACCAGCATAA 2154 0.4443 MDPNTVISGYEFDEWDLNGHYTNLVTDPFFYQSDVGPPEFSPDTILNSDPLVSSSATMAPAVEEDTDFSETFKFISQILMEENFEQKPCMCYDPLTLQHTEKSFYDALELEPSLPLSPYQHPLESPDGNSSNSTTDSANSHDLKPSSPNTPVSGGGDALHSSTHAPSFFVPPSALTKINDGTLDLDSSASKLLAENIFSDAESMLQFRRGLEEASKFLPQRPQLFTGLESTTVSAEPKEGRGLTVKLENSTGVKSRKNHARQEEEEGRSKKHSEVCVDEENEISEIFDKVLLSVENVPLCAEKNVSVAVEDINTKLSEQLLSVDGGKVRSKRQGKKKETVDLRTLLVLCAQAVSSSDNRTANELLKQIRQHSSALGDASQRMAHYVANALEARLVGAGTGTQIFYMSYKTFTTTDYLKAYQVFISACPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLSSRIGGPPKLRITGIEYPQPGFRPSERIEETGRRLAKYCKRFNVPFDYKAIPSRNWETIQIEDLEIESNEVLAVNCLVRFKNLLDESIEVSSPKNAVLNLIRKMNPHIFVHSVVNGSYNAPFFVTRFREALFHYSSIYDMFDTLVSRENEWRLMLEREFLGREIMNVVACEALERVERPETYKQWQARNTRAGFRQLPLDKEIMAKFRGKLREWYHKDFVFDEDGSWMLQGWKGRILYASTCWVPA* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00364 717 MobiDBLite consensus disorder prediction 252 273 - -
Lapu5g00364 717 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 266 710 IPR005202 -
Lapu5g00364 717 MobiDBLite consensus disorder prediction 115 165 - -
Lapu5g00364 717 MobiDBLite consensus disorder prediction 123 157 - -
Lapu5g00364 717 MobiDBLite consensus disorder prediction 231 273 - -
Lapu5g00364 717 ProSiteProfiles GRAS family profile. 333 715 IPR005202 -
Lapu5g00364 717 Pfam GRAS domain family 342 714 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00364 Lapu-Chr5 3016423 3019410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00364 71 717 GRAS Transcription Factor Family AT1G07530 50.360 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu5g00364 GRAS 1.7e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00364 - - aprc:113855970 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00364 5 3016423 3019410 Lapu11g00584 11 9139021 9142486 PCT
Lapu11g00585 11 9144491 9148128 Lapu5g00364 5 3016423 3019410 PCT