Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00363 ATGCTTTCCACGAACTCTCTTGTGCAGAATTTTGGTGGTCCTATCTCGGTGTTTCCAGATCAGAACCAAGTGACGGAGGGGATTGAGTTTGATGATTCATCTTCTCCTTCTTCTGGTACAAGCTCAAGTGGAGAATCGACTAAGTACTCCAACAACATCCTTAGATACATAAGCGACATCCTCATGGATGAGGAAGACGATTTGGAGAACAAACCCTGCATGTTGCAGGAATGTTTGAGACTCCAGGCTGCCGAAAAATCGTTCCTTGATGTCCTTGTTCATAACAGTTACCCTTCCACTTTCAGTGCTGAAAGCCTTGGCATCGTAGACTCTGATGAAAATTTTGGTCCCACTGCTAGTTTTGAGAGCAATGGCAGCTGCACCACTGATAATTCATGTGAGTCTGACTTGGTCAACAGTGTGGGTGAATTTGACTCTTCTTTCCTACGACAGCAAACCCATTTATTTGATTCCCCAGATGTAGTCGATGCATTTAGGGTTCGTGATGGAACCTGGAATCTCTTTCAGTCCCATACAAGGCCGCTGGTCGTGGAAGAGGGTTCTGCTGCTTCAGCATCCCGAGAAAAGAGAAGCCTTCAGATGGATGATGATGCTTTTCATGAACAAGATGGAAGAAGAGGCAGCAAGGTTTCAGCTGTCTTTTCTGACGAGTCAGAGTTACCAGAGATCTTAGATGAGGTGCTGCTTTGTCAAACTGGAAGAAGTGGATCTAGTTCTGAACCATCACAAGGTGTTGATTTAGGAGGGTCCCATGGAAAGGCAACACGCTCACGTTCAAAGAAAGGGTCCACCAAAGCGGGTACCGCTGTAGATTTATGGACCCTTCTAACTCAATGTGCACAGGCAGTGGCAAGCTTTGACCAAAGGAATGCAAATGACTTACTCAGCCAGATTAGGCTACACTCTTCACCTTATGGGGATGGCCTCCAGCGTTTGGCTCATTACTTTGCCAGTGGCCTTGAGATAAGGTTGGCTGCTGGGACCCCATCATACGTGCCGCTAGAAGTGGCAACTGCTGCTGATATGTTGAAAGCTTACAAACTATTTGTTACATCCTCCCCTTTGCAAAGGATGTCAAATTATTTGACCACCAAGACAGTCATTAGTCTTGTGAAAAATGAGAGCAGGGTTCATATTATTGACTTTGGCATTTGCTATGGTTTTCAGTGGCCCTGCCTTATCAAAAGGCTGTCAGAAAGAGATGGTGGTCCTCCAAGGCTTCGTATAACAGGAATTGATCTTCCTCGGCCAGGATTTCGGCCTGCGGAAAGGGTTGAGGAGACAGGGCGGCGTTTGGAAAACTACTGCAAGAAGTTCAATGTCCCTTTTGAATACAATTGCCTTGCACAGAAATGGGAAACTATAAAACTTGCAGATCTCAAGATAGACAGGAATGAAGTAACTGTTGTTAGCTGTTTCTACCGGCTGAAGAACCTGCCTGATGAAACTGTGGCAGTGAACTGTCCAAGAGATGCTGTGTTGAAGTTGATTAGGAAGATCAATCCGAACATCTTCATCCATGGGGTGGTCAATGGCACTTACAGTGCACCCTTCTTCCTGACACGGTTCAGGGAAGCGCTATACCACTTTTCATCACTGTTTGATATGTTTGAGGTTAATGTGCCTCGTGAAGACTCGCAAAGGGTGATGTTTGAGAAAGGGTTGCTCGGAAGGGATGCCATTAACGTTATAGCGTGTGAGGGGGCTGAGAGGGTTGAGAGACCGGAGACCTACAAACAGTGGCAGGTTAGGAACCTGAGAGCTGGGTTCAAACAAGTTCATTTGGATCCTCAGTTGGTGAATTATGCGAAACAAATGGTAAAGAGGGAATATCACAAAGATTTTGTAGTGGCTGAGGATGGCAAGTGGGTTTTGCAGGGGTGGAAAGGGCGAATTCTAAATGCCATTTCTGCTTGGACTCCTGCTTGA 1950 0.46 MLSTNSLVQNFGGPISVFPDQNQVTEGIEFDDSSSPSSGTSSSGESTKYSNNILRYISDILMDEEDDLENKPCMLQECLRLQAAEKSFLDVLVHNSYPSTFSAESLGIVDSDENFGPTASFESNGSCTTDNSCESDLVNSVGEFDSSFLRQQTHLFDSPDVVDAFRVRDGTWNLFQSHTRPLVVEEGSAASASREKRSLQMDDDAFHEQDGRRGSKVSAVFSDESELPEILDEVLLCQTGRSGSSSEPSQGVDLGGSHGKATRSRSKKGSTKAGTAVDLWTLLTQCAQAVASFDQRNANDLLSQIRLHSSPYGDGLQRLAHYFASGLEIRLAAGTPSYVPLEVATAADMLKAYKLFVTSSPLQRMSNYLTTKTVISLVKNESRVHIIDFGICYGFQWPCLIKRLSERDGGPPRLRITGIDLPRPGFRPAERVEETGRRLENYCKKFNVPFEYNCLAQKWETIKLADLKIDRNEVTVVSCFYRLKNLPDETVAVNCPRDAVLKLIRKINPNIFIHGVVNGTYSAPFFLTRFREALYHFSSLFDMFEVNVPREDSQRVMFEKGLLGRDAINVIACEGAERVERPETYKQWQVRNLRAGFKQVHLDPQLVNYAKQMVKREYHKDFVVAEDGKWVLQGWKGRILNAISAWTPA* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00363 649 MobiDBLite consensus disorder prediction 240 270 - -
Lapu5g00363 649 MobiDBLite consensus disorder prediction 185 219 - -
Lapu5g00363 649 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 216 640 IPR005202 -
Lapu5g00363 649 MobiDBLite consensus disorder prediction 27 47 - -
Lapu5g00363 649 Pfam GRAS domain family 281 647 IPR005202 -
Lapu5g00363 649 MobiDBLite consensus disorder prediction 190 219 - -
Lapu5g00363 649 ProSiteProfiles GRAS family profile. 270 647 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00363 Lapu-Chr5 3003354 3005303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00363 14 648 GRAS Transcription Factor Family AT2G29060 42.792 6.57e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu5g00363 GRAS 4.1e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00363 - - aprc:113855970 1035.79