Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00354 ATGAGAGAGCAAATCTTTGGAGATAAGATGCATGCAATAACAACAACTCTCCCTCTCAATGCAAACACCTTTCTTTGTTGTGCCAACACTCACCTTCCTCTCAGATCTCTTCCACCAATTTGTTGCATACTCACTTGTAAAATTAGCTATGCTAGTTGTTTCCACCGTTCACAGTGGAAGCAGCAGAAAAAAGAAAGATGGGGCAATAGAATGATGGTGGTGAGAGCAAGGCGTGGCGAGTCTCCGTACGAAGTTTTGGGTGTGTCTCCATCAGCAACTGTCAATGAAATAAAAAAGGCGTATCGGAAACTTGCTCTAAAGTATCATCCCGATGTCAATAAAGAGGAAAAGGCACAGGAAAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGCTCCCGCAAAAGATATGATTCTGGAAGTCGAGGTTATGATTTTTCACGAGGAAGCCAGAGTAGGAATGCTCAACCTGAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAACTGGGAAGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTTAATATTACAGATCAAAATGATGATTATAGAACACCTGAGGGAGGAAATGCATCCAACTTTTCTGGGAGAGAGACACCAAGCAGTAGTAGTCAAGGTGAAGCTAGCAAGGGAAACAGAAGCGTTGAGGATAACCTTGAGGAAATAGAAGCCACTCTGGCTCAGTTGAAAAAGGAATTAGGCTTGTAG 861 0.41 MREQIFGDKMHAITTTLPLNANTFLCCANTHLPLRSLPPICCILTCKISYASCFHRSQWKQQKKERWGNRMMVVRARRGESPYEVLGVSPSATVNEIKKAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSRGYDFSRGSQSRNAQPEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDQNDDYRTPEGGNASNFSGRETPSSSSQGEASKGNRSVEDNLEEIEATLAQLKKELGL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00354 286 SUPERFAMILY Chaperone J-domain 54 141 IPR036869 -
Lapu5g00354 286 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Lapu5g00354 286 Coils Coil 263 283 - -
Lapu5g00354 286 PRINTS DnaJ domain signature 117 137 IPR001623 -
Lapu5g00354 286 PRINTS DnaJ domain signature 101 116 IPR001623 -
Lapu5g00354 286 PRINTS DnaJ domain signature 83 101 IPR001623 -
Lapu5g00354 286 Pfam DnaJ domain 82 142 IPR001623 -
Lapu5g00354 286 CDD DnaJ 82 134 IPR001623 -
Lapu5g00354 286 MobiDBLite consensus disorder prediction 232 263 - -
Lapu5g00354 286 SMART dnaj_3 80 137 IPR001623 -
Lapu5g00354 286 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Lapu5g00354 286 MobiDBLite consensus disorder prediction 139 162 - -
Lapu5g00354 286 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 53 233 - -
Lapu5g00354 286 MobiDBLite consensus disorder prediction 228 269 - -
Lapu5g00354 286 Gene3D DnaJ domain 79 199 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00354 Lapu-Chr5 2940151 2945031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00354 83 143 C2H2 Transcription Factor Family AT1G74250 40.299 1.91e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00354 - - gmx:100812972 451.055