Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00343 ATGGAGTACTCTGTGGAATCTTTGGGAAGAGATCTTAAGAGCGTGAGGAAGTACTACGGAAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCGCAGCTTAAAGGGTTGCACAATTTTCTAGTTGAAAGAGAGGAAGAAATTTTGAGGGCCCTCAAGCATGATTTGGGGAAGCATTACGTCGAGGCTTTCAGAGATGAGTTGTTCCATGATGATTACTCGCAGGTAGGAACGTTAATGAAGACCTTAAACTTCGCCAAAAAGTATTTGAAAAAATGGATGGCCGGGGAAGAGGCTAAATTGCCAAAAATAGCACTGCTTTCAAGTGCTGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTCCCCTTTGGGCTGTCCTTGGAGCCACTCATAGGAGCAGTAGCTGCTGGAAACACTGTAGTTCTAAAGCCTTCAGAGATGTCCCCTACTTGCTCTTCTCTTTTAGCCACTGTCCTCCCAACTTACCTGGACAACAATGCCATTAAGGTCATCGAAGGCGGGCCAGAAGTGGGGGAGCTACTCTTAGAGCAAAGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTGGGAAGGATTGTTATGTCTGCTGCAGCTGTGCATCTTACTCCAGTGACTTTGGAGTTGGGTGGAAAATGTCCAGCACTGGTTGATTCTCTTACTTCTTCTTGGGACAGAGAGGTGGCTGTGAAACGAGTTTTGGTGGCTAAATTCGGGGCTTGTGCAGGACAAGCATGCATAGCAATCGATTATGTCCTCGTAGAGAAGAGTTTCAGTTCTACATTGGTGACATTGATGAAGGTTGGGATCAAGAAAATGTTTGGAGAAAATCCAAAAGAGTCCAACAGTGTTGCAAGGATAGTTAATGAAAAACATTTCATGAGACTGAAGAATCTTCTCACAGATCCAAGGGTCAAAGAGTCGGTAGTTTTTGGTGGTTCAATGAACGAAAATGACTTATTTATTGAACCCACAATATTGTTGGATCCCCCACTTGATTCAGCAATCATGACTGAGGAAATCTTTGGCCCAGTGCTTCCAATTATCACACTGGAGAAGATTGAACACAGTGTTGAGTTCATAAGCTCAAGGCCTAAACCATTAGCAATTTATGCCTTCACGAAAAACCAAACTCTACAGAGAAGAATGGTATCTGAAACATCATCCGGAAGTCTTGTTTTCAACGATGCAATCCTACAGTACATAGCGGATACCCTGCCATTTGGAGGAATTGGTGAATGTGGGTTTGGCAAGTACCATGGGAAGTTCTCCTTTGACGCTTTCAGTCACCATAAGGTTGTGGCCAGAAGAAGTTACTTGACTGATTTTTGGTACAGGTTTCCTCCATGGACTCTTAACAAGCTCCAACTAATTGAAGTGTCTTACAATTTGGATTATCTTGGAATACTTTTAGTTCTGCTTGGCTTAAAGAAGTCAAAGCGGTCCTTATTTTAG 1497 0.4309 MEYSVESLGRDLKSVRKYYGSGKTKEASWRESQLKGLHNFLVEREEEILRALKHDLGKHYVEAFRDELFHDDYSQVGTLMKTLNFAKKYLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSEMSPTCSSLLATVLPTYLDNNAIKVIEGGPEVGELLLEQRWDKIFFTGSARVGRIVMSAAAVHLTPVTLELGGKCPALVDSLTSSWDREVAVKRVLVAKFGACAGQACIAIDYVLVEKSFSSTLVTLMKVGIKKMFGENPKESNSVARIVNEKHFMRLKNLLTDPRVKESVVFGGSMNENDLFIEPTILLDPPLDSAIMTEEIFGPVLPIITLEKIEHSVEFISSRPKPLAIYAFTKNQTLQRRMVSETSSGSLVFNDAILQYIADTLPFGGIGECGFGKYHGKFSFDAFSHHKVVARRSYLTDFWYRFPPWTLNKLQLIEVSYNLDYLGILLVLLGLKKSKRSLF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00343 498 Pfam Aldehyde dehydrogenase family 24 448 IPR015590 GO:0016491
Lapu5g00343 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 446 IPR016162 GO:0016491
Lapu5g00343 498 FunFam Aldehyde dehydrogenase 225 428 - -
Lapu5g00343 498 SUPERFAMILY ALDH-like 13 465 IPR016161 GO:0016491
Lapu5g00343 498 PIRSF ALDH 3 484 IPR012394 GO:0006081
Lapu5g00343 498 PANTHER ALDEHYDE DEHYDROGENASE 6 483 IPR012394 GO:0006081
Lapu5g00343 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 428 IPR016163 GO:0016620
Lapu5g00343 498 FunFam Aldehyde dehydrogenase 16 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00343 Lapu-Chr5 2851047 2854679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00343 1 492 Aldehyde Dehydrogenase Gene Family AT4G36250 52.642 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00343 K00128 - gmx:100798020 845.499